| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_24865 |
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| Symbol | RPN5 |
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| ID | 7196815 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 1758116 |
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| End bp | 1759878 |
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| Gene Length | 1763 bp |
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| Protein Length | 457 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | regulatory proteasome non-atpase subunit 5 |
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| Protein accession | XP_002176845 |
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| Protein GI | 219110187 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GACCTGACTA TGGCGTGGAC TGTTGGGCGT TGTCTCCTCC CGTCTTCTTC GCTGACTGTG
AATAAACATT TAGTTTCTGT GTTGTCCCTC GGTGATCTCT TACGTCTACC TTGTATATTC
TAGTGCTATG GCTTCCGAAG GCGCTTCTGG TGCCGCTTCG GGCGGCCAGT TGCAAGAAAA
GTTGGACCTG TCGAAGGAAA CCGACGCCAA AATAGAACAG GCTCGAACGC TCGTCAACGC
GGGACAGTTG CCGGAAGCAC TCGCTCTACT ATCCGCGTTG GAAAAACAAT GCCGGGTGGG
GAACGACAAT CCTTCTTTGG TCCGTGTCTG CGAAGAAAGC CTCAAGCTGT GCCGGCAAGT
CGGCGACGAA GACGCCATGG TCGACACGAT CCAAAGCCTG GTGACGCGAC GCTCACAAAA
GACCTCCGCC GTAAAAGCCC TGGTGCAGAC GGCCTTGCCA TGGTGCGTCG AAGAACCCTT
CGCACCTTTG CCAGTGTCCA CCGATTCCGA AATTGCCTTT CGGGATCGTT TGGTCGTCGT
CTTGCGGGAC GTTACCGACG GAAAGCTCTT TTTGGAACGG GAGCGGGCGC AGTTGACCCG
CGCGTTGGCG ACCATTAAGG TACGTGTGCA ACACCTTGCC GTGAGAGCAT ACTGATTCGC
GATTCTCTCA TTGAATCTAA CCGTGTGTTG GTGTCACAAT GGTCCGGATT CTTACCCGTT
ACGGTTGTAT TTTAGGAACA ACAAGGGGAT ATTTCTGAAG CCGCCAACGT GTTGCAAGAT
GTACACGTTG AAACTTACGG TTCACTTTCC AAAAAGGATA AGATCGAATT TATTCTCGAG
CAAATGCGTC TTACGCTGGC CAAGAAAGAT TTTGTCCGGG CTGCCATTGT TGCAGGAAAA
GTATCAAAGA AAAATTTGGC GGAAGAGAAC ATGAAAACGT ACAAGGTCCA ATTTTATACA
CTCATGACAA TTTACCATCG GCACGATAAG AACGCTCTCG ATTTGGCCAG AGATTATCAT
GCTATTTACT TGACTCCGCA TATATTGGCG GACGGTGTCA AATGGAGGGA AGCCTTGCAA
GCGACGGTCG TTTTCTTGGC GCTTAGTCCG TACGACAACG AACAGCAAGA TATGTTGAAT
CGGATTGCCC TGGAGGAGAA CTTGGAAAAA CTTCCGGCTT GCAAGTGAGT ATCGTGCTTT
GTGTAAATGA CAGTACTGGC TAGTGTAGTG TTCACGAAGT ATTCTTGTTG GTTGCCAGTG
TCTACTTTCT CATTATATTC GTTTGGTTCT GGACAGAAAA ACGATTGATC TCTTGCTCAA
GAAGGAAATC ATTAATTACC CAATGACGCA TCAAGCCGAA CTCGAAGCGC TACCGGTATG
TCACGAAGGT GGCGAAGATC TGGCGGCGCA CTGGCACGAA GTTTTTCACC GCCGCATTAT
TCAGCACAAT ATTCGCGTCG TCTCGGTTTA CTACAAACGT ATTCACGGTG CCCGTCTCGC
ACAGCTCTTG CAACTGGAGC CCGCTCGGGT CGAAAAGGAA ATAGCATCCA TGGTCAGCGA
AGGCTCGATT TACGCCAAGA TCGATCGCCC CAAAGATATT GTTCGCTTTT CACAACCCAA
AACGGCGGAA GCGGTTCTTT CGGACTGGGC TTCGGACATT GATAAGCTGC TTAATTTGGT
CGAAACAACC ACACATTTGA TTGACAAGGA AAACATGACG AGTTCGTAGT GATCTATTAA
GCTTGAAAAG GTTTTACTCC GCC
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| Protein sequence | MASEGASGAA SGGQLQEKLD LSKETDAKIE QARTLVNAGQ LPEALALLSA LEKQCRVGND
NPSLVRVCEE SLKLCRQVGD EDAMVDTIQS LVTRRSQKTS AVKALVQTAL PWCVEEPFAP
LPVSTDSEIA FRDRLVVVLR DVTDGKLFLE RERAQLTRAL ATIKEQQGDI SEAANVLQDV
HVETYGSLSK KDKIEFILEQ MRLTLAKKDF VRAAIVAGKV SKKNLAEENM KTYKVQFYTL
MTIYHRHDKN ALDLARDYHA IYLTPHILAD GVKWREALQA TVVFLALSPY DNEQQDMLNR
IALEENLEKL PACKKTIDLL LKKEIINYPM THQAELEALP VCHEGGEDLA AHWHEVFHRR
IIQHNIRVVS VYYKRIHGAR LAQLLQLEPA RVEKEIASMV SEGSIYAKID RPKDIVRFSQ
PKTAEAVLSD WASDIDKLLN LVETTTHLID KENMTSS
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