Gene PHATRDRAFT_24820 details

Gene Information

• Locus tag: PHATRDRAFT_24820
• Symbol: CPN60_1
• ID: 7196793
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: +
• Start bp: 1669080
• End bp: 1671306
• Gene Length: 2227 bp
• Protein Length: 579 aa
• GC content: 50%
• Product: mitochondria-targeted chaperonin
• Protein accession: XP_002176830
• Protein GI: 219110157

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.684223
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAAATTCGAT TCCATCCCTT CTTTTCGTTT TGGATTTTGA TTCATTCATT CATCAAAGCT 
TCGGCTGAAC CGTCTTCGAT CATGTTGTCG TCCTCCATCT CTAGAGCTGC TTCTCGTTCG 
CTGACTGGCC GAACGAACTT GACTTCGGTT CGAGGATTTG CCAAACAAAT CAAATTTGGC 
GTCGAAGGTC GCGCTGCCAT GCTTCGTGGC GTGGACACGT TGGCGGATGC CGTCCAGGTA 
AGGACCAAAC GTGAGAAGCC GGATTCCCTA ATTTTATAAA ATTTGCTTTA TTTTCGCAAG 
GAATTCGGAG TTGGATCGTT TAATCTGTTG GAGATTTCTC CTGTGGATCT TTTCCATTGC 
GTTCGTTGAA AATCGCGAGG CCGTCGTCGA GGTCTTTCAG GAGGCCGACT TCACTGTCAG 
GCACAGTGGT TCGCTTACCT TTATAACATA CCATCGACAG CATCCCTTGA GTATTTCTAG 
CGAAGGGAAA TGAAGAGATC GATTCAATGT GCTGACACCT TTCTCGCGCT TTTTCTGTAG 
GTGACGCTTG GCCCCAAGGG TCGTAACGCC ATTATTGCTC AGCCTTACGG CCCTCCCAAG 
ATCACCAAAG ATGGTGTCAC GGTCGCGAAA TCCATTGATT TTGAAGACAA GTTTGAAGAT 
ATGGGTGCGC AGTTGATCAA GTCGGTTGCT TCCAAGACGA ACGATATCGC TGGAGACGGC 
ACGACTACGG CTACAGTCCT CGCCCGGGCG ATCTATTCCG AGGGCTGCAA GGCTGTGGCG 
GCTGGACTCA ACCCGTTGGA TCTTCGACGA GGAATCCAAC TTGCCGTGAA CTCGGTAGTA 
AAGACGTTGG GAGAAATTAG TCGCCCTATC TCGTCCAAGG CGGAAGTCTC ACAGGTCGGA 
ACGATCTCGG CAAACGCGGA CCGTGAAATC GGTGATTTGA TTGCCGATGC CATGGAACGT 
GTTGGTAAAG AAGGCGTCAT TACTGTTCAA GACGGAAAGA CTTTGGAGAA CGTACTGGAT 
GTGGTCGAGG GTATGAAGTT CGAACGAGGA TTCATAAGTC CTTACTTTAT TACGGACGCG 
AAAACTCAGA CGTGCGAGCT TGAAAATCCA ATGATCCTGC TCGTAGAAAA GAAAGTCAGT 
AATCTTCAAC AGCTTGTGCC CCTTTTGGAA TCTGTGATTA AGAGCCAAAG CTCCTTGTTG 
ATTGTTGCCG AAGATGTTGA AAGTGAGGCC CTTGCCACTT TGGTGGTAAA CAAGCTTCGT 
GCCGGCATTA AGGTGTGTGC CGTAAAGGCT CCTGGATTTG GCGACAACCG CAAGGCCACG 
ATGCAGGATC TGGCCATTTT GACCGGAGGA ACCGTTATTT CGGAAGAAAT GGGTATGAAG 
TTGGAAGAAA CGCAGCCGCA CCACTTGGGA CGATGCAAAA AGGTGACCGT CACCAAGAAC 
GAGACTGTTG TGTTGGATGG AGCTGGCGAG CAAGCTTCAA TCCAGGAACG ATGCGAGTTG 
ATCCGTAACG GAATTGATAC TACCAAGTCG GACTACGAAC GTGAAAAGCT GCAAGAACGT 
CTCGCGAAGT TGTCAGGAGG AGTCGCCGTG ATTCAGGTCG GAGGTGCTTC GGAAGTCGAA 
GTTCAGGAAA AGAAAGACCG TGTCGTTGAC GCCTTGAACG CAACTCGGGC TGCTGTCGAA 
GAAGGTATTG TACCGGGAGG TGGGAAAGCC TTGCTTTACT GCTCAACGAA ATTGGACGAA 
GTTGCTGAAA AAGAAGCGAT CAACATGGAC CAAAAGATTG GTGTTGAAAT CATCAAGCGA 
GCCCTCAAGG CCCCGCTCGC TACTATCGTT TCCAACGCCG GAGAAGAAGG TGCCGTCGTC 
TGCGGCGAAC TTATTAAGCC TGATGTTGCA GTGACATGGG GATTTGATGC TTCCATAGGG 
GAGTACCGTG ATTTAGTCGA AGCCGGTATC ATTGATCCAA CTAAGGTGAC CCGTACTGGC 
ATCGTTGATG CTGCATCCGT TGCTGGCTTG CTCACAACAT CGGAATCCAT GATTGCGGAC 
AAGCCGGATG ATGGCCCATC CATGCCTCCG GGCGGCGGTA TGGGAGGAAT GGGCGGCATG 
GGTGGCATGG GCGGCATGAT GTAGACGAGT TTTCTTTGAA GCGATCGACG AGATTTTTCT 
CGCTCTAGAG TTTTTCGAAA TGTTTAGGAT AGACCCCAGA ATTATTGTAG TTACCGGTTG 
AGATTTT 

 

Protein sequence

MLSSSISRAA SRSLTGRTNL TSVRGFAKQI KFGVEGRAAM LRGVDTLADA VQVTLGPKGR 
NAIIAQPYGP PKITKDGVTV AKSIDFEDKF EDMGAQLIKS VASKTNDIAG DGTTTATVLA 
RAIYSEGCKA VAAGLNPLDL RRGIQLAVNS VVKTLGEISR PISSKAEVSQ VGTISANADR 
EIGDLIADAM ERVGKEGVIT VQDGKTLENV LDVVEGMKFE RGFISPYFIT DAKTQTCELE 
NPMILLVEKK VSNLQQLVPL LESVIKSQSS LLIVAEDVES EALATLVVNK LRAGIKVCAV 
KAPGFGDNRK ATMQDLAILT GGTVISEEMG MKLEETQPHH LGRCKKVTVT KNETVVLDGA 
GEQASIQERC ELIRNGIDTT KSDYEREKLQ ERLAKLSGGV AVIQVGGASE VEVQEKKDRV 
VDALNATRAA VEEGIVPGGG KALLYCSTKL DEVAEKEAIN MDQKIGVEII KRALKAPLAT 
IVSNAGEEGA VVCGELIKPD VAVTWGFDAS IGEYRDLVEA GIIDPTKVTR TGIVDAASVA 
GLLTTSESMI ADKPDDGPSM PPGGGMGGMG GMGGMGGMM