Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_24493 |
Symbol | |
ID | 7196002 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 704582 |
End bp | 705555 |
Gene Length | 974 bp |
Protein Length | 249 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176635 |
Protein GI | 219109763 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.608395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CATTCCTACG CTGGTCAACA AATCAACCTC CCAGATTGCA ATCGCGCAAC CTGAAAAAAT AAAAATACGA ACTATGGCCA CCCGCTGTGC TTTTGAGAAC TCGAACGAGA TCGGCGTGTT TGCCGCGCTA ACAAATGCAT ATTGCCTGAC AGGTACGTTT TGTTGTGGTC TATTGACAAC TGTAGAGTGC GTGAAGCATT TACATCTTGA AATGGTACAT CTGACGCTTT TTGTCATCTT GAAGGGATTG GTGGATCCGA GAACTTTTAC TCTGTCTTTG AAGCCGAATT GGCGGAACAT ATCCCCGTCA TTCATGCTAC GATTGGTGGC AACCGCTTTG TAGGACGCAC AACTGTTGGA AATCGGAGAG GCATTCTGGT GCCAAACACG ACCACCGATC CGGAGTTGCA ACACTTACGA AATTCTCTTC CGGATGCCGT TGTCGTTCAG CGTATAGAGG AGAGACTTTC AGCTTTGGGG AACATAATCG CAACCAACGA CCACGTGGCC TTGGTACACC CGGATACCGA TCGTGAAACT GAAGACGTGA TTGCGGATGT CTTGGGAGTG GAAGTTTTTC GTCAAACTGT TGGGGGGCAG GCTCTGGTTG GATCCTACTC CAAATTCACG AACCAAGGTG GTATGGTCCA TCCAAGAACC ACGGTCGAAG ATATAGAAGA GTTGTCCTCC CTGTTGCAAG TCCCGTTGGT AGCCGGTACC GTCAACCGCG GTTCCGATGT ATTAGGAGGT GGTATGGTGG TGAACGACTG GGCTGCCTTC TGTGGACTTG ATACAACCGG TACCGAAATC TCGGTGATCG AGAGTATTTA CAAGCTTTCC AATCGTGGTC AACAAAGTAT GCAATCCGAT ATTGTCACGA ATATGCGAAG TTCGCTCATC GATCAACTCT CGTAAGATGG AGCGATTCGT TTTGACTATT GTTAATTTTC GACTAAGCAT GCTGCAATAC CCTT
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Protein sequence | MATRCAFENS NEIGVFAALT NAYCLTGIGG SENFYSVFEA ELAEHIPVIH ATIGGNRFVG RTTVGNRRGI LVPNTTTDPE LQHLRNSLPD AVVVQRIEER LSALGNIIAT NDHVALVHPD TDRETEDVIA DVLGVEVFRQ TVGGQALVGS YSKFTNQGGM VHPRTTVEDI EELSSLLQVP LVAGTVNRGS DVLGGGMVVN DWAAFCGLDT TGTEISVIES IYKLSNRGQQ SMQSDIVTNM RSSLIDQLS
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