| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_24161 |
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| Symbol | |
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| ID | 7199335 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011699 |
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| Strand | - |
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| Start bp | 6622 |
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| End bp | 9234 |
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| Gene Length | 2613 bp |
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| Protein Length | 812 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185507 |
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| Protein GI | 219130721 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.314931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CACTAACTGT AAACAGGACA AACACAACGA CTTGACCATG AAACAGTCGC GTACTCGTGC
TAGTTTCGTG CCAATCCTCT TTCTTGTCCT CCGTACTTCT GCAATCATTA ACAGTGTTAC
CGCTTTTCTG GCAACGTCGG CTCGTCTCGC TGCGTCTCGT CCCGTTTTCA CTTCCGGTGG
CCGCAAGTCC TTTGGCAGTC AGTCTACCAG AGCTTCTTTC TCTTATTCTC GTCGATTTTC
ACATCTGGCC ATGACTGGGA TTAATCCTCC CGTCGCTCGT CGCGACGAGG ATCGTGTCAT
TTACGTAGGT GCGGCGCCGG AAGGCTGGAA GAAGGAACTT CCCCGACAGT CCGAATCATC
CACAGAAAGG CTGCTGGACC CTCCGACGGC GATTCCGGAT CCGTACGGTT GGATGCGCGA
TGAAAAACGC GAGAACAAGG ATATCCTGGA TCATCTCGAG GCAGAGAATG CTTACACAGA
AAGTCTAACT TCGCATTTGG AAGGGTTGCG TCAGACTCTA TATGATGAAA TGCTCGCGGC
AATTCAGGAA ACGGACTACA CCACGCCCCG TCCTCACGGT GACTGGTACT ACTACACTCG
CACCTTTGAG GGAAAGTCCT ACACTACGCA TGTGCGGGCG CCGCGCCAAC CGGATACTCC
GCTTTCCATT CAATGGGACA GAAAGGCAGA ATCTCCTATT CTACCCGGCG AGCAAATCAC
CTTGGACGTC AACGTACTGG CCGAAGGGAA AAAGTATTGT TCCACGGGAT CGGTCACTAA
ATCACCTTCG CAAAAATACT TGGCCTATTC GGCTGATTTC ACCGGCGGAG AAACATGTGT
AATGTATGTC AAGGACTTGA CGAGTGGAGA TATTGTAGAT CACGACGAAA CACTCGAAAT
GTCTGGTTCG ATTCGATGGG GTGCGGACGA CAACGAGCTA TTCTATTTGA AAATGGATGA
AGCGCACCGC CCGTATCAAG TCTACCGTCG TCGACTGGGC AACAACGATC CAGATGAAAT
GCTTTTGGAA GAAAAAGGTA ATTTTTGTGT TTTGATGTGG ACGCTTCCGG TTGGACTGCA
ACTCAACCAC GTTCCAATTT TGAAGACGAA CTGTACTGGA TGGGAATCTC CAAATCGCTC
GACGGCAAGT ACTTGTTTAT TGAAGTCTCG TCCAAAGAGA CATCGGAAAT CCACTTTTTG
GACTTGACAG ATCCGAACGC CAACTTGCAG TGCGTCGCGC CTCGCCGATT GAAAGTGCTC
TACGACGTCG AGCACCGCAA TGGTCGTTGG TGGATCGAAT CCAATGTAGG CGGTTTACCA
GATATGGCGT TGTGGGCAGC TCCAGCCAAT GCTCACTGTG CCGATGAATG GCAGCTCGTT
ACGGACGCTG CTGGCGTAGC GCTCTTTGAG GGCGGTGAAG ACCGAGCGTT GTCGGCGATT
ACCTGCTTTC AAGACTTTGT CGTTATGCAA GGTCGTGAAG GTGGATTACC ACGGGTGTGG
ATTGCCGCCA TGGATGGAGA TAGCGTGCAA ACGTTTCAAC AACTCTTGTT TGACGAGGAT
GCCTATGACG CTGGCGTTGG TACCCACTAC GAATACGATA CAAGAAAGAT TGCGGTTGCT
TACGATTCGC TCGTAACGCC AACGCAATCT CTAGAGATTG ACTTGGCCAA TACAAACGAG
CGCACGGTTC TCAAAGAAAG GGCTGTTCCA GGATACGATA AGGAACTGTA CGCCTGTGAA
CGCACGACTG TCAAGTCCCG GGACGGAAGC GTAGACATTC CGGTAAGCCT TGTCTATCGC
AAAGACGTTA TGGAAGATCA TCTTCAATCC GGGAAGGCCG TTCACACTCA TTTGTATGGC
TACGGCTCTT ATGGAGCTTG TATCGAAGCC GACTTTCGTT CCACTCGGCT GCCTTTGCTG
AACAGGGGCG TTATTTACGT TATTGCACAC ATTCGGGGCG GCGGAGAGAT GGGACGCAAG
TGGTACGAAG AGCCCAACGG TGCCAAATAT CTTTGCAAGA AGAATACCTT TGATGATTTC
GTGGATGTTG CCAAGTGGTT GATCAGCGAT CGCAAACTTA CATCGCCGGA TGTGCTATCG
TGCGAAGGAC GGAGTGCGGG TGGGCTTTTG ATTGGCTCCA GTATCAATCA AGCTCCTGAG
CTTTTTCAGA TGGCCATTCT TGGTGTCCCT TTTGTGGATG TGCTATGTAC TATGGTTGAT
GCGAGTATTC CTCTGACGGC TGTAGAATGG GAAGGTAAGA GACTAGTAGG ACTTCTTTTG
GTGGATAATG CGTCAATCGT CGCCTCATTT CTTGTACTTC TTATAGAATG GGGGAACCCG
AACGAAGAAA AGTACCACCA ATACATGAAG GAGTATTGCC CCGTCCAAAA CGTAAAGAAA
GCCAGGTACC CTTCCTGCCT GCTAACGGGG GGCCTGCATG ATCCTCGAGT ACAGTACTGG
GAACCGTCCA AGTTTGCTGC CACGCTTCGT CATACCCAGT CCAACGAATC TGGCCCAGTT
TGTGTCAAGA TGGATATGAG TGCGGGTCAT TTTAGCGCCA GTGACCGATA CAAGTACTTG
AAAGAGCTTG CCTTTGACTA CGCTTTCCTT CTC
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| Protein sequence | MKQSRTRASF VPILFLVLRT SAIINSVTAF LATSARLAAS RPVFTSGGRK SFGSQSTRAS
FSYSRRFSHL AMTGINPPVA RRDEDRVIYV GAAPEGWKKE LPRQSESSTE RLLDPPTAIP
DPYGWMRDEK RENKDILDHL EAENAYTESL TSHLEGLRQT LYDEMLAAIQ ETDYTTPRPH
GDWYYYTRTF EGKSYTTHVR APRQPDTPLS IQWDRKAESP ILPGEQITLD VNVLAEGKKY
CSTGSVTKSP SQKYLAYSAD FTGGETCVMY VKDLTSGDIV DHDETLEMSG SIRWGADDNE
LFYLKMDEAH RPYQVYRRRL GNNDPDEMLL EEKDELYWMG ISKSLDGKYL FIEVSSKETS
EIHFLDLTDP NANLQCVAPR RLKVLYDVEH RNGRWWIESN VGGLPDMALW AAPANAHCAD
EWQLVTDAAG VALFEGGEDR ALSAITCFQD FVVMQGREGG LPRVWIAAMD GDSVQTFQQL
LFDEDAYDAG VGTHYEYDTR KIAVAYDSLV TPTQSLEIDL ANTNERTVLK ERAVPGYDKE
LYACERTTVK SRDGSVDIPV SLVYRKDVME DHLQSGKAVH THLYGYGSYG ACIEADFRST
RLPLLNRGVI YVIAHIRGGG EMGRKWYEEP NGAKYLCKKN TFDDFVDVAK WLISDRKLTS
PDVLSCEGRS AGGLLIGSSI NQAPELFQMA ILGVPFVDVL CTMVDASIPL TAVEWEEWGN
PNEEKYHQYM KEYCPVQNVK KARYPSCLLT GGLHDPRVQY WEPSKFAATL RHTQSNESGP
VCVKMDMSAG HFSASDRYKY LKELAFDYAF LL
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