Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_23292 |
Symbol | |
ID | 7195740 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011690 |
Strand | - |
Start bp | 492323 |
End bp | 494178 |
Gene Length | 1856 bp |
Protein Length | 572 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | L-galactono-1,4-lactone dehydrogenase |
Protein accession | XP_002184261 |
Protein GI | 219128103 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.260276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CGTACATTGC ATACGTTTCC TTGGTGTCTG GAAGATTGAT TTCGCTGAAT AAAGATGCAC ATCAGCAGTG TTACATCCCG AAAAAGTCTG CAACGAATTC TTGGTTCCTC CAGAAGCTAT CTCGGAGCCT ACAATGTCAC GGGTAGATTC CTTTCGAACG GTCCCAAGTT TGCGGTCAAA GCAAAGCGAT CTGATTTGAC CGTCCTCTCT GCGTCGGCGG TAGTAGCCTT GGCGGTGTTT CAGTACAAAG AATACAGCAG AACGAAGCTG GAACTAAGCG CCGAAGAGAC TACCACGACT TTGTTGAACT GGAGTGGCAC TCATGTGGTA CAAGTCGATA ACAACCGATA CTGGGAACCC GAAACAGTGC AAGAAGTAGA GGATATTGTT AGATCTTGCC ATAAACGGGG TCAGCCGGTC CGGCCGATTG GATCGGCTCT AAGTCCAAAT GGGATTGCGT TTCATCAGAA CGGTATGATG AGCATGGCCA ATCTCGATCG GATTCTTCAG GTGGATGTGA AGAATCAAAG AGTCACTGCC CAGGCCGGAG CTCGTGTTAG CCAGGTGGTC GACGCTCTCC GTCCCTACCA CTTGACACTT CCGAATCTTG CAAGTATCGC TGAGCAGCAA ATGGGTGGCT TCATTCAAGT CGGCGCGCAT GGAACGGGAC GGTCTATTGC TCCAGTTGAT CATTACGTCA CGGAAATCAA ACTTGTTACC CCAGCCAAAG GCACCATTAC ACTTACAAAA GATGATGGTG AACTATTTGA GCTCGCCAAG GTGGGCTTGG GATGTTTGGG AGTGGTAGTA GAAGTTACCA TGGAATGCGT ACCGGCACAT AGACTAGTGG AACATACATT TGTGTTGACA CGCGAAGAAG CCGTTACCCG ATTGCAAGAG TTGCTTACGG AACACAAACA TATGCGTTAC ATGTGGATAC CATATACTGA CTCGGTTGTG GTTGTGACGA ACGATCCCGA AGATCAAGTG AAAGAAATTC CTAAATTGAA AAAAATAAGC GAAGACGAAC GCTTTGCCCC TCTGCGCGAT TTAATGTTGG AGCTTTCTAA CGAATGGCCC GAACCGTATA CGAAAGAATC GCTGCAAAGT ATCGGATTTG GAGAGCTCCG CGATGCGCTA CTGGCTATCG ATCCTTTGGG AATCAAGCAC GTCAAACGAT GTAACGAGGC CGAAGCAGAA TTTTGGAAAC GAAGCGAAGG CTATCAGGTT CGTCCTAGTG ACGAACTACT ACAATTTGAT TGCGGAGGGC AGGTATGTTT CCACCTCGAG ATGCTTGTTT GACATTCCTG TCACATTGGC ACGTACTCAC CGAAGCCTTG CTACTTTCTT TACAGCAATG GGTATGGGAA GTCTGCTTTC CAACGGGGAC TCAGGAAAAG AGCAGTGGCA ATGATATGGA CTTTATGACA GAGTTGTTGG CTGGAATCGA ACGTGAGGAA ATCCCCGCTC ACTCTCCTAT CGAACAGCGC TGGAGTGCGT CGTCCTCGTC TCTCATGTCA CCTGCGTACG GACCCAAAGA TGGCTTGCAT AGTTGGGTAG GTATCATCAA CTACCTTCCG TCCGAAGATG AAGGTCAACG CAGGGACATT TCGGAACTCT TTACCGGTAG GTACTGCAAT TTGATGAGAA ATGTGGGGCA AGCTGTGAGT GCCACTAGTC ACTGGGCCAA GCTAGAGCGT CCGAAATCGA TGTGGCAGCT CGTCGATACA CAGTTATTCT TGCAGACACG GTTTCCGTTG AGGCTCTTCA ACGAAGCTCG AGATATTTAT GATCCCAAGA ATATTCTGGG AAACGATCTA CTCAATCTGG TTGTGGGCAA ACCAGGAACC AAGTAA
|
Protein sequence | MHISSVTSRK SLQRILGSSR SYLGAYNVTG RFLSNGPKFA VKAKRSDLTV LSASAVVALA VFQYKEYSRT KLELSAEETT TTLLNWSGTH VVQVDNNRYW EPETVQEVED IVRSCHKRGQ PVRPIGSALS PNGIAFHQNG MMSMANLDRI LQVDVKNQRV TAQAGARVSQ VVDALRPYHL TLPNLASIAE QQMGGFIQVG AHGTGRSIAP VDHYVTEIKL VTPAKGTITL TKDDGELFEL AKVGLGCLGV VVEVTMECVP AHRLVEHTFV LTREEAVTRL QELLTEHKHM RYMWIPYTDS VVVVTNDPED QVKEIPKLKK ISEDERFAPL RDLMLELSNE WPEPYTKESL QSIGFGELRD ALLAIDPLGI KHVKRCNEAE AEFWKRSEGY QVRPSDELLQ FDCGGQQWVW EVCFPTGTQE KSSGNDMDFM TELLAGIERE EIPAHSPIEQ RWSASSSSLM SPAYGPKDGL HSWVGIINYL PSEDEGQRRD ISELFTGRYC NLMRNVGQAV SATSHWAKLE RPKSMWQLVD TQLFLQTRFP LRLFNEARDI YDPKNILGND LLNLVVGKPG TK
|
| |