Gene PHATRDRAFT_23292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_23292 
Symbol 
ID7195740 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand
Start bp492323 
End bp494178 
Gene Length1856 bp 
Protein Length572 aa 
Translation table 
GC content49% 
IMG OID 
ProductL-galactono-1,4-lactone dehydrogenase 
Protein accessionXP_002184261 
Protein GI219128103 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.260276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGTACATTGC ATACGTTTCC TTGGTGTCTG GAAGATTGAT TTCGCTGAAT AAAGATGCAC 
ATCAGCAGTG TTACATCCCG AAAAAGTCTG CAACGAATTC TTGGTTCCTC CAGAAGCTAT
CTCGGAGCCT ACAATGTCAC GGGTAGATTC CTTTCGAACG GTCCCAAGTT TGCGGTCAAA
GCAAAGCGAT CTGATTTGAC CGTCCTCTCT GCGTCGGCGG TAGTAGCCTT GGCGGTGTTT
CAGTACAAAG AATACAGCAG AACGAAGCTG GAACTAAGCG CCGAAGAGAC TACCACGACT
TTGTTGAACT GGAGTGGCAC TCATGTGGTA CAAGTCGATA ACAACCGATA CTGGGAACCC
GAAACAGTGC AAGAAGTAGA GGATATTGTT AGATCTTGCC ATAAACGGGG TCAGCCGGTC
CGGCCGATTG GATCGGCTCT AAGTCCAAAT GGGATTGCGT TTCATCAGAA CGGTATGATG
AGCATGGCCA ATCTCGATCG GATTCTTCAG GTGGATGTGA AGAATCAAAG AGTCACTGCC
CAGGCCGGAG CTCGTGTTAG CCAGGTGGTC GACGCTCTCC GTCCCTACCA CTTGACACTT
CCGAATCTTG CAAGTATCGC TGAGCAGCAA ATGGGTGGCT TCATTCAAGT CGGCGCGCAT
GGAACGGGAC GGTCTATTGC TCCAGTTGAT CATTACGTCA CGGAAATCAA ACTTGTTACC
CCAGCCAAAG GCACCATTAC ACTTACAAAA GATGATGGTG AACTATTTGA GCTCGCCAAG
GTGGGCTTGG GATGTTTGGG AGTGGTAGTA GAAGTTACCA TGGAATGCGT ACCGGCACAT
AGACTAGTGG AACATACATT TGTGTTGACA CGCGAAGAAG CCGTTACCCG ATTGCAAGAG
TTGCTTACGG AACACAAACA TATGCGTTAC ATGTGGATAC CATATACTGA CTCGGTTGTG
GTTGTGACGA ACGATCCCGA AGATCAAGTG AAAGAAATTC CTAAATTGAA AAAAATAAGC
GAAGACGAAC GCTTTGCCCC TCTGCGCGAT TTAATGTTGG AGCTTTCTAA CGAATGGCCC
GAACCGTATA CGAAAGAATC GCTGCAAAGT ATCGGATTTG GAGAGCTCCG CGATGCGCTA
CTGGCTATCG ATCCTTTGGG AATCAAGCAC GTCAAACGAT GTAACGAGGC CGAAGCAGAA
TTTTGGAAAC GAAGCGAAGG CTATCAGGTT CGTCCTAGTG ACGAACTACT ACAATTTGAT
TGCGGAGGGC AGGTATGTTT CCACCTCGAG ATGCTTGTTT GACATTCCTG TCACATTGGC
ACGTACTCAC CGAAGCCTTG CTACTTTCTT TACAGCAATG GGTATGGGAA GTCTGCTTTC
CAACGGGGAC TCAGGAAAAG AGCAGTGGCA ATGATATGGA CTTTATGACA GAGTTGTTGG
CTGGAATCGA ACGTGAGGAA ATCCCCGCTC ACTCTCCTAT CGAACAGCGC TGGAGTGCGT
CGTCCTCGTC TCTCATGTCA CCTGCGTACG GACCCAAAGA TGGCTTGCAT AGTTGGGTAG
GTATCATCAA CTACCTTCCG TCCGAAGATG AAGGTCAACG CAGGGACATT TCGGAACTCT
TTACCGGTAG GTACTGCAAT TTGATGAGAA ATGTGGGGCA AGCTGTGAGT GCCACTAGTC
ACTGGGCCAA GCTAGAGCGT CCGAAATCGA TGTGGCAGCT CGTCGATACA CAGTTATTCT
TGCAGACACG GTTTCCGTTG AGGCTCTTCA ACGAAGCTCG AGATATTTAT GATCCCAAGA
ATATTCTGGG AAACGATCTA CTCAATCTGG TTGTGGGCAA ACCAGGAACC AAGTAA
 
Protein sequence
MHISSVTSRK SLQRILGSSR SYLGAYNVTG RFLSNGPKFA VKAKRSDLTV LSASAVVALA 
VFQYKEYSRT KLELSAEETT TTLLNWSGTH VVQVDNNRYW EPETVQEVED IVRSCHKRGQ
PVRPIGSALS PNGIAFHQNG MMSMANLDRI LQVDVKNQRV TAQAGARVSQ VVDALRPYHL
TLPNLASIAE QQMGGFIQVG AHGTGRSIAP VDHYVTEIKL VTPAKGTITL TKDDGELFEL
AKVGLGCLGV VVEVTMECVP AHRLVEHTFV LTREEAVTRL QELLTEHKHM RYMWIPYTDS
VVVVTNDPED QVKEIPKLKK ISEDERFAPL RDLMLELSNE WPEPYTKESL QSIGFGELRD
ALLAIDPLGI KHVKRCNEAE AEFWKRSEGY QVRPSDELLQ FDCGGQQWVW EVCFPTGTQE
KSSGNDMDFM TELLAGIERE EIPAHSPIEQ RWSASSSSLM SPAYGPKDGL HSWVGIINYL
PSEDEGQRRD ISELFTGRYC NLMRNVGQAV SATSHWAKLE RPKSMWQLVD TQLFLQTRFP
LRLFNEARDI YDPKNILGND LLNLVVGKPG TK