Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_22554 |
Symbol | |
ID | 7194745 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | + |
Start bp | 299673 |
End bp | 301001 |
Gene Length | 1329 bp |
Protein Length | 419 aa |
Translation table | |
GC content | 56% |
IMG OID | |
Product | mannosyltransferase |
Protein accession | XP_002183068 |
Protein GI | 219125608 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GAGTAACACC TTGCCGTAAC ATCCAAAATG ACCACTGACA CTGCCGCTTT GTCGGACACG ACGAACAAGC CGCTACAGGT CGTGTTTCTG CATTTGGATT TGGGGATTGG GGGCGCGGAG CAGCTTGTCC TGCAGTTGGC GCACGCGTCG GCCTCTCCAC ACGTGGGACA CGAGGTGCAT CTCGTTACGA CCCGGTGCGA TCCCACCCAC TGCTTTGCAT CGGTCCAACC GGGAGGCGAC CTGCACGATG CCCTGCACGT GAAAGGACAA TGGATTCCCG CGGACCTGTG CGGCTACGCT CGCGCCTTTT GCAGTACCCT CCGTGTTCTC TATCTGAGTT TCTGGATTGC CCGTCGTTGG CCCGACGTGG ACCTCATTGT GGTTGACGTG CTGCCCACGC CGCTCCCTTT TTTGCGATAT CTTAGTCACG CCGCGTTGTT GTTTTACTGC CACTTTCCCG ATCAACTGCT CGTTCGACAA CCGTCGGCGT CGGGGCGTGT ATCGCAGAAT CATCGCGCAC TCGCGCTGGC CAAACACTAC TACCGACAAC TCCTGAATGC AGTGGAAGAG CTGTCTATGC GTCACGCCGA CCTGTGTGTG GTAAACAGTT GCTTTACCCA ACAAACGGTC CGAAACACCT TTCCCTCCTC CTTTCCCGAG CCCAATCCAT TGCCGGTTCT CTATCCCGCC CTGGATGTTG CCTCTCTCGA TCGACAACAA CAGCAACAAG AAAAACTCGA GGGAGCGCCC AGCATTGTCG ATTTAATATC TTCCTCCTCA AACAAGAAGA AAAATCTGAT AGTTTCGCTC AATCGCTACG AACGTAAAAA GAATTTGGAT TTGTTGATAC GTGCCGCAGC TTGGCTGCGA CAACACAACC AACCGATGCC CGAAGCCGTC GCGAACCAGA CGGAGCAGAC CCACTTTGAA ATCGTCATTG CCGGTGGCTA CGACGTGCGC AACGTAGAAA ATGTGGAATA CCGTGCCGAA CTGGAACAAC TCGCCAACCA GCTCAACGTC CCCGTTACCT TTCTGCAATC CATCGACGAT GGGACCCGTG CGTCGCTCCT CGCTCATGCT TTGTGCGTGG TATACACGCC GACGGGGGAA CATTTTGGCA TTGTACCGCT CGAGGCCATG TATGTGGGTA CACCCGTGGT GGCTGTTGAT GACGGAGGAC CGAAGGAAAC GATTCGACAC GGAGTCACGG GATTCCTGTG TCAGCCCACA CCGGCTGACT TTGGTCAAGC CCTACAAACG CTGCTGAACG ATCCGGAACA TGCGGAGCGC ATGGGACGGG CCGGGCGGGA ACACGTTCGG GATACCTTT
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Protein sequence | MTTDTAALSD TTNKPLQVVF LHLDLGIGGA EQLVLQLAHA SASPHVGHEV HLVTTRCDPT HCFASVQPGG DLHDALHVKG QWIPADLCGY ARAFCSTLRV LYLSFWIARR WPDVDLIVVD VLPTPLPFLR YLSHAALLFY CHFPDQLLVR QPSASGRVSQ NHRALALAKH YYRQLLNAVE ELSMRHADLC VVNSCFTQQT VRNTFPSSFP EPNPLPVLYP ALDGAPSIVD LISSSSNKKK NLIVSLNRYE RKKNLDLLIR AAAWLRQHNQ PMPEAVANQT EQTHFEIVIA GGYDVRNVEN VEYRAELEQL ANQLNVPVTF LQSIDDGTRA SLLAHALCVV YTPTGEHFGI VPLEAMYVGT PVVAVDDGGP KETIRHGVTG FLCQPTPADF GQALQTLLND PEHAERMGRA GREHVRDTF
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