Gene PHATRDRAFT_22388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_22388 
Symbol 
ID7203578 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011685 
Strand
Start bp263818 
End bp264704 
Gene Length887 bp 
Protein Length233 aa 
Translation table 
GC content54% 
IMG OID 
Productperoxiredoxin 
Protein accessionXP_002182930 
Protein GI219125318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CACCTTTTTC ATAGTCTCTT CGCAACACGA ACGAGCGCTC CTCGACTCGA CATATTGACA 
GTAACCATCA CAATGTGGTC CTATAAGCGC GTGAATATCC TCACGTTGGT CGCTGGTGTC
GCACTGCTCG TTGCGTCCAC GCCAATCTTG GCGTCGGCGG CGACGTCCCG CGTGGAATTT
CCGTCCGACT GGACGACGCC CTTATCCGAA GGAGACAGGG TTCCGGAGGT CACCTTTCTC
ACGCGGAGTC GCGTGGAATC GAACGATCCG AACCCGTTCG ACTGGAAGTT GCGTACGACG
GATGACTACT TCAAAGGCAA GCGGGTAGTG GTCTTTGCGA TTCCGGGAGC CTTTACCCCC
ACCTGCTCGT CCACGCATTT GCCCGGATAC GAGGCAGCTT ACGACAAAAT TCGTCAACAA
GGAGTAGACG ATGTGTACTG TAAGTCGTTC TCTCTTTGTG TGTGTGTGTG CACAAACTCG
ACGCGATGGT AGTCTCACCT TGTCTCTTGC CATTTTGGGC CTTTCGTTGG CACTGTGGGA
TCACAAAATT AGGTTTGTCG GTCAATGACG CCTTCGTCAT GCGCCAGTGG GGTTTGCACC
AGGGTTTGAC GGAAGACAAA ACCGTTGGTG GCTTGGGTTT TACCAAGGTC AAATTGATTC
CTGACGGTGC CGCGGCCTTT ACCCGAGGCA TGGGCATGTC CACACTGTGG GACGTGGAAC
GAGGCTTTGG CGAACGCTCC TGGCGTTACA GTATGGTCGT CAACGACGGT GTCATTGAGA
AACTCTTTGT GGAACAACCG CTTTTGCAAA ATTCTGGACC CGATCCGTTC GAAGTCAGTG
ACGCCGACAC CATGCTCGCG TATTTGCAGC AAAAAACGGA GCTTTGA
 
Protein sequence
MWSYKRVNIL TLVAGVALLV ASTPILASAA TSRVEFPSDW TTPLSEGDRV PEVTFLTRSR 
VESNDPNPFD WKLRTTDDYF KGKRVVVFAI PGAFTPTCSS THLPGYEAAY DKIRQQGVDD
VYCLSVNDAF VMRQWGLHQG LTEDKTVGGL GFTKVKLIPD GAAAFTRGMG MSTLWDVERG
FGERSWRYSM VVNDGVIEKL FVEQPLLQNS GPDPFEVSDA DTMLAYLQQK TEL