Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_22388 |
Symbol | |
ID | 7203578 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011685 |
Strand | - |
Start bp | 263818 |
End bp | 264704 |
Gene Length | 887 bp |
Protein Length | 233 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | peroxiredoxin |
Protein accession | XP_002182930 |
Protein GI | 219125318 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CACCTTTTTC ATAGTCTCTT CGCAACACGA ACGAGCGCTC CTCGACTCGA CATATTGACA GTAACCATCA CAATGTGGTC CTATAAGCGC GTGAATATCC TCACGTTGGT CGCTGGTGTC GCACTGCTCG TTGCGTCCAC GCCAATCTTG GCGTCGGCGG CGACGTCCCG CGTGGAATTT CCGTCCGACT GGACGACGCC CTTATCCGAA GGAGACAGGG TTCCGGAGGT CACCTTTCTC ACGCGGAGTC GCGTGGAATC GAACGATCCG AACCCGTTCG ACTGGAAGTT GCGTACGACG GATGACTACT TCAAAGGCAA GCGGGTAGTG GTCTTTGCGA TTCCGGGAGC CTTTACCCCC ACCTGCTCGT CCACGCATTT GCCCGGATAC GAGGCAGCTT ACGACAAAAT TCGTCAACAA GGAGTAGACG ATGTGTACTG TAAGTCGTTC TCTCTTTGTG TGTGTGTGTG CACAAACTCG ACGCGATGGT AGTCTCACCT TGTCTCTTGC CATTTTGGGC CTTTCGTTGG CACTGTGGGA TCACAAAATT AGGTTTGTCG GTCAATGACG CCTTCGTCAT GCGCCAGTGG GGTTTGCACC AGGGTTTGAC GGAAGACAAA ACCGTTGGTG GCTTGGGTTT TACCAAGGTC AAATTGATTC CTGACGGTGC CGCGGCCTTT ACCCGAGGCA TGGGCATGTC CACACTGTGG GACGTGGAAC GAGGCTTTGG CGAACGCTCC TGGCGTTACA GTATGGTCGT CAACGACGGT GTCATTGAGA AACTCTTTGT GGAACAACCG CTTTTGCAAA ATTCTGGACC CGATCCGTTC GAAGTCAGTG ACGCCGACAC CATGCTCGCG TATTTGCAGC AAAAAACGGA GCTTTGA
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Protein sequence | MWSYKRVNIL TLVAGVALLV ASTPILASAA TSRVEFPSDW TTPLSEGDRV PEVTFLTRSR VESNDPNPFD WKLRTTDDYF KGKRVVVFAI PGAFTPTCSS THLPGYEAAY DKIRQQGVDD VYCLSVNDAF VMRQWGLHQG LTEDKTVGGL GFTKVKLIPD GAAAFTRGMG MSTLWDVERG FGERSWRYSM VVNDGVIEKL FVEQPLLQNS GPDPFEVSDA DTMLAYLQQK TEL
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