Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_21538 |
Symbol | |
ID | 7202509 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011681 |
Strand | - |
Start bp | 374730 |
End bp | 375700 |
Gene Length | 971 bp |
Protein Length | 256 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181714 |
Protein GI | 219122773 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.561777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGACGATTGG CTTTGGTGAT TGACAGAAAC ACGCACGTAC CAGGGTTTTG GTTGCTCTCT AGAATCATTG TAGTATTCCC TTTCATTCGT CTTTCAAAGA GTCTTCCGCC GAAAGAACAA TGTCGAGTTT ACGGAATGCG GTCAAGCGGG TCACGCATAA GGAGCGGGCG CAACCGCAAA GTCGTGCCCA TTTAGGTATC CTCGAAAAGA AAAAGGACTA CCGCGGCCGC GCCCAGGATT ACCACCGTAA GGAAGCCCGA ATCAAGGCGA TTCAAGAAAA GGTAGCGATG CGTAATCCCG ACGAGTTTTA CTTCGGGATG AAGAATGCCC AAGTGCTGGA TGGCAAACAT CGCAAGACGT TGGAAGCCAA GCAAAAGGAA TTCGAAGCAG ATGTTGGCTT GGACACAGTC CGGATCATGA AAACTCAAGA TCTCGGTTAT GTTCGGATGC AAAAGCAAAG AGACGCCAAG AAAGTTGAGC GTTTGCAGTC CTCTCTCCAT TTCCTGGCGG ACAACTCGGA ATCCAAGAAA CGGAAGCACA CAATTTTCGT CGAATCTCGG CAGGTTGCCG AGAACTTCAA TGTTGCCGAG CATTTCGATA CGCTTCCAGA GCTCGCAGGT CGTACTTTTA ATCGTCCGAG AAAGCAAACG GTACAAGAAA TTGCGTTACG TGCTTCCGGC TCTGGTAGTG AAGTCGGCGA AGGTAACACA CAGATCTATC AGCCCACAAG GCAGGACCTA GAGAAGGAGG CTAAAAGAGC TCGCAAGGAG GCCCGTAAAC TAGCAAGAAT AAGGGGAGCT GGATACAAGG AGATGGAAGA GCGGAAGGAA CGGGTACAGA AGCTGGAACG GGCCGAAGCT CATTTAGTGA CGGAAAAACT GGTGCAGGGC AAAGGCCGGA AGCGCAAAAT TAAAGCGGCT GAAAATGGTC AACCTGCCCA GTACAAATGG CGTAGAAAGC GGCAAGGATA A
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Protein sequence | MSSLRNAVKR VTHKERAQPQ SRAHLGILEK KKDYRGRAQD YHRKEARIKA IQEKVAMRNP DEFYFGMKNA QVLDGKHRKT LEAKQKEFEA DVGLDTVRIM KTQDLGYVRM QKQRDAKKVE RLQSSLHFLA DNSESKKRKH TIFVESRQVA ENFNVAEHFD TLPELAGRTF NRPRKQTVQE IALRASGSGS EVGEARIRGA GYKEMEERKE RVQKLERAEA HLVTEKLVQG KGRKRKIKAA ENGQPAQYKW RRKRQG
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