Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_21379 |
Symbol | |
ID | 7202036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | + |
Start bp | 542025 |
End bp | 543120 |
Gene Length | 1096 bp |
Protein Length | 326 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181224 |
Protein GI | 219121752 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCTTGCAACA AGAGCGAACG GGAAGCAATC AGATTTTCTC AAATTCCGCT CGAGTACCTT TCCGCTACAG CGGATCGGGA GGAGCAACAA CACAGATCGG GGGCCTCGAG ACCCGATGGC CGAACGACTT GAAGAGTCGA TTCTACCAAA TGTTCTGGGA TCGGCCTGTG CCGGTATCAT AGCTCGCATT TCGACGCATC CACTCGATAC AACCAAAGCT CGCTTGCAGG CCCAAAGCGC CCCGAGGTTC CGAGGTCCTG TTGACGCTCT GGCACAGACT GCCAGAGCCG AAGGTATCAC CGGCTTGTAT CGAGGCTTTG GGGCAGTAAT CATCGGTGGC ACACCAGGGA CTGTTCTTTA CTTATGCAGT TACGATTTCG TTAAAAAAGG GCTTTCGCAA GCTTGGGAAT CACGTATGAA TCAACCTATG GAAGGCACGG GTGCAGATTT TGCCGTACAT TTTACGGCAG GAATGCTGGC AGAAACAATC GCATGCATCA TCTATGTTCC AGTGGATGTT GTGAAAGAAA GAATGCAAGT CCAACAGGGC TTACAAAGCT CACCATCGGC TTATAAAAGT AGCTGGGACG CTTTTCAGAA GATTGCAAGG TCCGAAGGCA TTACTGGAAT CTACAAGGGC TATACGGCTA CGTTGGGCTC GTTTGGTCCC TTTTCAGCGC TGTACTTTGT CTTTTACGAA AAATTGAAAC GCTCGAGTTG TCAATATGTA TCCAGAGAAC CGTATACTAT ATCTGGCTCT TCGGGAAGAA ATACGGAACT TCCTTTTCCT TGGGTGGTAG GTTGTAGCGC TGGTGCTGGA GCACTAGCGT CGTGGCTTAC ATCGCCTCTG GATATGGCAA AATTGCGGCT ACAAGTGCAA CGTGGACATA TTGCGCAAAA TGCTTCTTCT TTGGCTCCAG TAACGTCATA TCGAGGCGTG TGGGACTGCT TAAAGCAGGC ACATAAGCGC GACGGATTTC GTGGCCTTTT TCGCGGTGCT GGTGCTCGAG TTCTCCATTT CGCCCCTGCG ACAACGATCA CGATGACTAG CTACGAAATG TGTCGCTCTC TGTTTGCGGG TATAGGAGGT GCATAG
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Protein sequence | MAERLEESIL PNVLGSACAG IIARISTHPL DTTKARLQAQ SAPRFRGPVD ALAQTARAEG ITGLYRGFGA VIIGGTPGTV LYLCSYDFVK KGLSQAWESR MNQPMEGTGA DFAVHFTAGM LAETIACIIY VPVDVVKERM QVQQGLQSSP SAYKSSWDAF QKIARSEGIT GIYKGYTATL GSFGPFSALY FVFYEKLKRS SCQYVSREPY TISGSSGRNT ELPFPWVVGC SAGAGALASW LTSPLDMAKL RLQVQRGHIA QNASSLAPVT SYRGVWDCLK QAHKRDGFRG LFRGAGARVL HFAPATTITM TSYEMCRSLF AGIGGA
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