Gene PHATRDRAFT_21239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_21239 
SymbolH3.3 
ID7202224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp98106 
End bp99820 
Gene Length1715 bp 
Protein Length136 aa 
Translation table 
GC content46% 
IMG OID 
ProductH3.3 
Protein accessionXP_002181134 
Protein GI219121565 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GATAATTGTG CATCTTACTG TTACACTCTA ACATTTGTGT GCAAAACTCC ACATCTTGTC 
CACAGATTTG GGGTTTGGCT GGGCTCTTCG TCAGCAGACG TCATTTGATC GAGCAAGTGA
TGGAAGTATA GAAGCCTAAA AAAAGAAGTA TTGTTAGCAC GATAGACGAA TATTGTGTTC
ATGTACGCTC GGTTTGGTTC GGAGCAATAA GTTTCATTAG GGAGACAACA AAACAATCGC
TCCGTGGCGT TGAAATCCTC TTCTCTGCGC GGTGTCAATG TTTCAAGGCT ACGGAGAATA
TCGTAGGAAC GGAACCAGTC AGACATACGA GCGCTTCCTG AAAAATAATT TCCCAAGATC
ATAGTAGTAA AGAAACGTGC ATTTCTACAC CATCTTCAAT CCCATCCACT CTTTGTTCCA
CTAAACGCGT CCAAAACACG AAATCACTTC TACCAGCACA ATTCGCAATT TGACAACGGA
ATTCAAATAA GGTAAGCATT CAGAAACAAT CATCATTCAC CATCGATCAC CCCAAACCAG
TGACTAGAAT GGATGTATAC GTTCGACTTA AAATGGATTG TGTAAAGACG AGATCACGAT
ACGATGGTAT AATCTGGATT GAAGGAACAG CGTGTCCAAA AGCCTGAAAT TGGTCCAGGT
CCCCAATCCA AAAGTACCTT GGAGCGATTC TCTTGGACAT GGCAATTTTG AGCCTTTTCG
TAGACTCCCT ACATTTTACA ATGATTGCTT TCAAGCTGTC CCTGTGCAAG AAGTAGATTT
CGAGTCTTCT AACTCTGGAT GCGGAGCCAT GGGTGAAAGG CTTGATACTG GTCGATCATG
GTCTTGCTCC TTTCTCTGCG ACCTAAAAAC ATTCTCCTAT CATTTCTTCT CGCTGCAAAC
TCCGACTGTT GACTGTTGTC GTTGGTCGCC TATAACGTCT TCAAGCTGTG TTTACGTAGA
TTTTCCCTGA ACCCGTTATG TCGCATGCGA GTTTTTTAAT CGTTCCTGGT CTGAAAATTC
AATCGTACAC GTAATTTTAT TTTACAATAC GGGACAGGCA GTCACGCTTT CCCATAATTT
GTCGGTATTT TCTCACATTC CTGACTTCCG TTCGGCTACA GGAAGAAACA TGGCTCGTAC
CAAGCAAACA GCTCGCAAGT CTACCGGAGG CAAAGCTCCG CGCAAGCAAC TTGCCACCAA
GGCTGCTCGC AAGAGCGCCC CCACTGCCGG CGGTGTCAAG AAGCCTCACC GTTATCGCCC
GGGAACGGTC GCACTTCGTG AGATCCGAAA ATACCAGAAG AGCACCGAGC TTCTCATCCG
CAAGGCTCCC TTTCAGCGCT TGGTCCGTGA AATCGCCCAG GACTTTAAAA ATGACCTCCG
ATTTCAGTCG ACAGCTGTTC TTGCTTTACA GGAAGCTTCT GAAGCCTACC TTGTCGGCCT
TTTCGAGGAC ACCAACTTGT GCGCCATTCA CGCCAAGCGT GTCACCATTA TGCCTAAGGA
TATCCAGTTG GCCCGTCGCA TCCGAGGAGA GCGTGCCTAA GAAGTTTCTG GGGTTTTGAT
CCTTCTCGTG TTTTTGGTGC GAAGCACATG TGTATTGCGG GGTTGATAGC GCAAGGCTGC
GGTTACTCTC TTCTTGCGCA GGACAATGCA GATAACTTAG GATCGTAAAA AACACTATGC
ACTATGCAAA TCTTATTTTA ACCCGAGTGG AAAAG
 
Protein sequence
MARTKQTARK STGGKAPRKQ LATKAARKSA PTAGGVKKPH RYRPGTVALR EIRKYQKSTE 
LLIRKAPFQR LVREIAQDFK NDLRFQSTAV LALQEASEAY LVGLFEDTNL CAIHAKRVTI
MPKDIQLARR IRGERA