Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_21228 |
Symbol | |
ID | 7202078 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | + |
Start bp | 43605 |
End bp | 44414 |
Gene Length | 810 bp |
Protein Length | 225 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181123 |
Protein GI | 219121541 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TATAAAAACA GATATCCTTA TCCATTACGT GTATATTCAC AGCTAGCCGC ACATCAACTC ATGTCAGAAA AGAAGAAGAA TTTACGCAAG TTGAGCCATA GATTGTCTTA CGTCTTGAGA CACGGTGCCC TAGATATGGG TCTCGAGATG ACTGCTGACG GGTACGTCCC AGTTGACAGT TTGTTGATTT TGCAGCATCC CAAGTTCATT GGTAATCAAT GGACGCTTCA GGATATACGG GATGTAGTCA GCGATAGTGA CAAGCAACGA TTCAAGCTGC GCGAAAAGCC TGCTTCGGAT TATGGACAAG CAACTCAACG TACCGTTGAA AGACTAACAC AGACTACGAC TGCCACCAGC AATATGCTTC TCTGTATTCG GGCCAATCAA GGTCACACAA TTTCATTCAT AAAGCCAGAG TTGCTGCTAG TCCGTCTGTC CGCTGAAGAA TTACGTCGAA TTCCCACCAT TGTACACGGA ACATACTCTG CTTTGTGGCC GGCTATACAA ATTTCTGGGG GGTTGTCGCG GATGAAGCGG ACGCATATAC ATTGTGCATC CGGTCTGATT GGAGAGAACG GAGTAATATC TGGGATGCGA CGAGGCTGCG ATGTCTATAT ATACATAAAT GCGGAGGCAT GCGCTGACGC CGGCGTTGTT TTCTACCGCA GTGACAACGG AGTGCTGCTT ACAGCTGGAA TAAAAGGAGG AATTCTACCT TGTAAGTATT TCTCGCACGT GACAGACGCT GGCGGAAACG AGATTCTCGT TCGGTCCAAG ACGGAGGGAA GTAGGTCATG CCTAGGCTGA
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Protein sequence | MSEKKKNLRK LSHRLSYVLR HGALDMGLEM TADGYVPVDS LLILQHPKFI GNQWTLQDIR DVVSDSDKQR FKLREKPASD YGQATQRHTI SFIKPELLLV RLSAEELRRI PTIVHGTYSA LWPAIQISGG LSRMKRTHIH CASGLIGENG VISGMRRGCD VYIYINAEAC ADAGVVFYRS DNGVLLTAGI KGGILPCKYF SHVTDAGGNE ILVRSKTEGS RSCLG
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