Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_19979 |
Symbol | AOX1 |
ID | 7200599 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | + |
Start bp | 435282 |
End bp | 437625 |
Gene Length | 2344 bp |
Protein Length | 706 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | precursor of oxidase acyl-coa oxidase |
Protein accession | XP_002179644 |
Protein GI | 219117708 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.304645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTTCCCGTTA CCTCTGTCTC CCTCCCCAAA CTCCCGAGGT GAATTCTTTC AGCTCTCTTG CATCTTACTC CTCAACATGC CAGTAAACGA AGACTTACGG CGCGAACGCG CGCGAGCGAC TTTTGATGTA AAGCAACTCA CTCACATGCT TGATGGGGGT TCCGATCGGA CAGCCCGTCG CCGTCAATTG CAAGCCATCA TTGAGCGTGA TCCCACCGGG ATTTTTTCAA ACGACGATAA CGCTTATTTG CATCGAACTG ATCGTCATGT TCGTGGATTG GCCAAACATG TACGCATGGT GGAACTTTGT CGGACACTCG GTATTGGAGA CAAATACGAC GGACAGGTAG TCATGGATCC GGATTTTCCA GTCCTCTTGG CAGCGCTGGC GGATGATTTA CCGACGGCGC TCCATTGGAT CATGTTTGTC CCCAACATTG TCTCTTTATG CGACGAAGAA CAGCAACGCG CCTGGTTACC GCTTTGTCGG GATTGGAAAA TGATTGGATG CTACGCTCAA ACCGAACTCG GACACGGATC CAACGTGCGG GCCCTCGAAA CTACAGCAAC GTTCGTGTCG GAAGATCAAG ACGGCACAAA GGGCGGCTCG TTCGTTATCA ATTCGCCGAC GATCACATCA GCCAAGTTTT GGCCCGGAAC CCTGGGAAGG ACGGCAAATC ACGCTATGGT GATTGCCCGG CTTATCGACG GCCACGGTAA AGATCAAGGC ATGCACAATT TTTTGGTACC CTTACGTTCA ATGAAAGATC ACAAGCTGCT ACCAGGAGTC AAGTCGGGTG ACATTGGACC CAAGATTGGT AGGTTGGTGG AGACGATTTG ATGGATGGGA ATGCGTGCGT ACAGTTACAG CAATTCATCG TTGTTTTGTT TTCAATAGGG TACAACGTGA TGGACAACGG TTTTGCTCAA TTCGATAACG TTAAAATACC ACGTCGAAAG TAAGTCTTTC TGAAAATCAA GAAAGTTTTG TGGCGTTTTG CTTTCGCTAA CCATAATTTG TGTTAGCATG GCCATGCGAT TCGCACATGT CGACGAACGT GGCCGTTACT CCAAAAAAAG CGTCTCGGCT GCGGCCTCAA AAATCTCGTA CATTACTATG ATGCAAGTCC GGGCGCACAT ATGCAACGAA GCGGGTAAAA ACTTGGCAGT AGCCTGTACG ATTGTCACCC GTTACTCCGC CTTGCGTCGG CAAGGTTACG CTTCGGATGG TGAATCGGAA TTGCAAATTC TGGATTACAA GCAACAGCAG CATCGGGTGT TCCCACTTAT TGCGGCGTCG TACTGTTTCT TTTTTACAGG AAAGCGCGTG ATGGAGCAGC TCAAAGATAT CGAAGACAAA CTTGTGTCGA ATAAGTCCAT TTCCAAAGCA GCAGTCACAG ATATCCACGC GTCCTCGTCG GCACTCAAAT CATTTACAAC AACAGTGGCA GCTGACGGGA TTGAAGATTG TCGCAAAGCA TGTGGTGGCC ACGGCTTTTT GCAATGTTCT GGCCTCCCCG AACTGATTAC GACCTACTTA CAGAGTCCGA CTGTGGAAGG TGACAATCAG ATGTTGCCCC AGCAAGTCGT TAAGGTGCTA CTTAAACTCG TCCAGACTGT ACAGGACGAC GGCGATTTAT CTGACTACGT ATCTTGCGAT TCGTATGGTT TAATTTCCTC TCTACAGTCT AATTTGAAGG GCGTAAAAGA AGACTGCCGG ATTGTTTCGG AAATCGACGT GATGAATTTG GACGCTTTAC TGGCTGCTTT GTGTCACCGA TCCGCTCGTC TTCTGGTGGG CGTAGCGTCT CAAATACAAG GCTCAATCTC AAGCGGCAAA TCCTATCAGG AAGCTTGGAA TGATGCTCTA GTAGAAATGG CCAGAGTCTC GCGTGCCTAT TCTCAATTCC TCTTGCTTCG TAACTTCATG GAAGGCATCG ACGGCGAAGA GAGGTCAGGT GCGATCGGTG TTGCCGAAGT GACCGTGCTG CAGAATCTCG CTCGACTTTT CGCCCTTTAT TGGATGGAGA AGGAACTCGG TGACTTTTTA GAAGACGGTT ACGTGACGGC CGACCATTCT CGATGGGTCC GAAGCGCTGT TTTGCAGCTT TTGGATTGCA TTCGTACTGA TGCGGTCTCT CTCGTAGATG CTCGAGACTT TTCTGACTTT AAGCTGAAGA GTGCTTTGGG TCGTTACGAC GGGGATGTGT ATCCTGCCAT CTTAAAAGCT GCTTTGCGAG ATCCTTTGAA CCACTCGGAT CCTGGACCTG GCTACGAACA GCACTTGAAA CGGTTGATTG CTGGTGGTAC TGGTACATAT AAAGCGACAG TATCCCGTCT ATAA
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Protein sequence | MPVNEDLRRE RARATFDVKQ LTHMLDGGSD RTARRRQLQA IIERDPTGIF SNDDNAYLHR TDRHVRGLAK HVRMVELCRT LGIGDKYDGQ VVMDPDFPVL LAALADDLPT ALHWIMFVPN IVSLCDEEQQ RAWLPLCRDW KMIGCYAQTE LGHGSNVRAL ETTATFVSED QDGTKGGSFV INSPTITSAK FWPGTLGRTA NHAMVIARLI DGHGKDQGMH NFLVPLRSMK DHKLLPGVKS GDIGPKIGYN VMDNGFAQFD NVKIPRRNMA MRFAHVDERG RYSKKSVSAA ASKISYITMM QVRAHICNEA GKNLAVACTI VTRYSALRRQ GYASDGESEL QILDYKQQQH RVFPLIAASY CFFFTGKRVM EQLKDIEDKL VSNKSISKAA VTDIHASSSA LKSFTTTVAA DGIEDCRKAC GGHGFLQCSG LPELITTYLQ SPTVEGDNQM LPQQVVKVLL KLVQTVQDDG DLSDYVSCDS YGLISSLQSN LKGVKEDCRI VSEIDVMNLD ALLAALCHRS ARLLVGVASQ IQGSISSGKS YQEAWNDALV EMARVSRAYS QFLLLRNFME GIDGEERSGA IGVAEVTVLQ NLARLFALYW MEKELGDFLE DGYVTADHSR WVRSAVLQLL DCIRTDAVSL VDARDFSDFK LKSALGRYDG DVYPAILKAA LRDPLNHSDP GPGYEQHLKR LIAGGTGTYK ATVSRL
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