Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_19000 |
Symbol | |
ID | 7197706 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 682203 |
End bp | 683403 |
Gene Length | 1201 bp |
Protein Length | 337 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | farnesyltranstransferase |
Protein accession | XP_002178555 |
Protein GI | 219115519 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.916261 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGGAGATTTT ATTAATCGGC TGGTTCCTAC AATTAGTCAA CTCGTAGAAA CCAAACATAC CTTATCCCAA TATGCGCGTT TCTCTGTTGG CTCTGGTCTC TCTGACGACC CTTTCGTCGG CGTCGGCCTT TGTCGCCCCG TCTACCTTCC ACTTTCGTCC TCGAGTGACC CTGCAATCGA CTGCCGCCAC GGACTTCGAC TTGAATCAGT ACATTGCGGA TAAGCTGCCT TTGATCGAAA AGGCCCTCGA TGAATCCGTC GTATCGACCG AGAAAGAGAC GGAAAAGATT GTCGAAGCTA TGAAATACTC GCTCATGGCG GGTGGCAAGC GGATTCGACC GGTCTTGTGC TTGGCAGCCT GTGAAATGTT CAACGACGGA GACTCTACAC CCGCCATGCC GGCAGCTGTT TCTTTGGAAA TGATTCACAC CATGAGCTTG ATTCACGACG ATTTGCCGAG TATGGACAAT GATGATCTGC GTCGGGGGAA ACCCACGTGT CACGTACGTA TTGTATTGGA ATCTTGACGA CTGTCAAAAG CCATCCTAGT CGCACTCACC GGACTCGTTA CCGATGCTGC CCTTTCACTT ACACTTATGC ACTGGAATTT GTATTGCAGG TGATTTACGG TGAAGACGTG GCTATCTTGG CCGGGGACGC ACTTTTGTCC GATTCCTTCA GACACGTCGC TGAGCAGACC AAGGGCGTCG CTGCGGACCG AGTCCTGGAT GTGGTGGTGC GACTCGGGCG CTCCGTTGGC GCCAAGGGTC TTGCCGGGGG GCAAGTGATG GATTTGGAAT GCGAAGGCAA GGGTTCCGCC ACGCTCGAAG ATTTGCGTTG GATTCACACG CACAAGACGG CGACCTTGCT GCAAGTCGCG GTTGCCAGTG GGGCCATTAT CGGTGGAGCC AGCGCGGAAG AAGTAAAAGC GTGTGAACAG TTCGCACTTA ACATTGGTCT GGCCTTTCAA GTTGCGGATG ATATTCTTGA TGTGACGCAG AGCACGGAAG AACTAGGCAA GACCGCCGGC AAAGACGAAG ATACCGACAA GACTACGTAT CCCAAGCTTT TGGGCCTAGA CGGTGCCCGG GAAGAAGCAG AGCGGCTGGT GGCCGAAGCC AAGAAATCCC TGGAGCCTTT TGGTGATCGA GCGACAGCTC TTTTAGCACT TGCTGACTTT ATCATCAATC GTAAGAATTA A
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Protein sequence | MRVSLLALVS LTTLSSASAF VAPSTFHFRP RVTLQSTAAT DFDLNQYIAD KLPLIEKALD ESVVSTEKET EKIVEAMKYS LMAGGKRIRP VLCLAACEMF NDGDSTPAMP AAVSLEMIHT MSLIHDDLPS MDNDDLRRGK PTCHVIYGED VAILAGDALL SDSFRHVAEQ TKGVAADRVL DVVVRLGRSV GAKGLAGGQV MDLECEGKGS ATLEDLRWIH THKTATLLQV AVASGAIIGG ASAEEVKACE QFALNIGLAF QVADDILDVT QSTEELGKTA GKDEDTDKTT YPKLLGLDGA REEAERLVAE AKKSLEPFGD RATALLALAD FIINRKN
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