Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_18872 |
Symbol | chlM |
ID | 7197982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 249972 |
End bp | 250810 |
Gene Length | 839 bp |
Protein Length | 258 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | magnesium-protoporphyrin IX methyltransferase |
Protein accession | XP_002178460 |
Protein GI | 219115329 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.333886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GAGTATTCGC TGCTTGCTCG ATATAACGAA AGAAAGCATG AAACAAGCCG GCGCAGTCTT TCTCGCCTTG CTGTCTAGCG CCAGCGCGTT CGTCCCCTCA GTCCATTCGG TGTCATCGGC TGGAAGTGCC CTTTTCTCCT CGGCGGACGA TAAGACCGAG GTCCGCGAAT ACTTCAACAC GGAAGGCTTC AGTCGGTGGA ACAAAATTTA TTCCGACACA GACGATGTGA ACTCTGTACA GATGGACATT CGCAACGGCC ACGACCAGAC CATTCAAAAG ATCCTCAAGT GGATTGCGGC GGACGGCGAT ATTGACGGCA AATCGGTCTG CGACTGTGGC TGCGGCGTCG GCAGCTTGGC TATTCCTCTG GCACAAATGG GCGCCAAGGT GTCGGCTTCG GATATTTCCG ACGCCATGTC AACTGAAGCT GCTCGCCGGG CCGGGGAACT TGGTGTCAAG GCCGACTTTT ACACGTCCGA TTTGGAATCG GTCTCCGGCA AATACCACAC CGTGACCTGC GTTGACGTGG CCATTCATTA CCCCGACGAT AAATTCAAAG AGATGGTCAC TCATCTCTGT AGCTTGGCGG AAGACCGTGT ATTGATCAGT TTTGCGCCCA AGACGTGGTA CTACGTTTTT TTGAAAAAGA TTGGAGAGCT TTTCCCGGGA CCCTCCAAAA CAACCAGAGC CTACTTGCAT GAAGAATCCA TTGTCCGTGA AGCGCTCCAA CAGGCTGGCT TTGAGGTTGC GCGGGATGAA ATGACGGCTA CTAATTTTTA CTTCTCGCGA CTTTTGGAAG CCAAACGTGT GTAATCAAGC AAGCTATACG AGACACTTT
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Protein sequence | MKQAGAVFLA LLSSASAFVP SVHSVSSAGS ALFSSADDKT EVREYFNTEG FSRWNKIYSD TDDVNSVQMD IRNGHDQTIQ KILKWIAADG DIDGKSVCDC GCGVGSLAIP LAQMGAKVSA SDISDAMSTE AARRAGELGV KADFYTSDLE SVSGKYHTVT CVDVAIHYPD DKFKEMVTHL CSLAEDRVLI SFAPKTWYYV FLKKIGELFP GPSKTTRAYL HEESIVREAL QQAGFEVARD EMTATNFYFS RLLEAKRV
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