Gene PHATRDRAFT_17967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_17967 
Symbol 
ID7196968 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp2452771 
End bp2453854 
Gene Length1084 bp 
Protein Length315 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176983 
Protein GI219110463 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.827795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCCAGCCCAA CCCAATTAGA ATACGATGGG ACGTCTATCT CGAGACAAAC GCGACGTCTT 
CTATCGACTC GCCAAAGAAA AGGGCTACAG AGCTCGATCA GCATTCAAGC TGCTCCAGGT
TGACGCCGAG TTCGACATTT TCGGTGCCCG TGGGGCTCCT GCCTCACTCG GTAACACAAT
TGAACCACTG CGCGTTCAAC GAGCCGTCGA TCTGTGCGCC GCACCCGGTA GTTGGTCGCA
AGTGCTCAGC GATAAGCTTT ACGAATTAAA TCATGCGACA GGGGATGCCG GCGCAAATTC
CGATCAAGCG TCCGATGCTC TAGCCAACGA CTTGAGCAGG ACTAGTTTAG ACATAGACGA
ACAACCCGAA GAACCTAGTA TTGTTGCAGT TGATTTGCAG CCAATGGCAC CGATTGATGG
CGTTTTGTGT CTACAGGGTG ATATAACAGC TCAGTCCACC GCACAAGATA TTATTAAGCA
CTTTCAGGGT AATCGCGCGG AACTCGTGGT CTGTGACGGC GCTCCCGACG TCACGGGACT
GCACGACGTT GACGAATACT TACAAGGACA GCTCTTGTTA AGCGCCATGA TGATCACCAC
CCACGTACTG TGCGAAAGGG GAACTTTTGT GGCCAAAATA TTTCGTGGCC GTAACGTTGG
ATTCTTGTAT GCACAATTGC GACTGTTGTT TGAACGGGTC AGTATTGCGA AACCCACCAG
CTCGCGCAAT TCGTCCATGG AGAGTTTCGT TGTGTGCCAG CGATTTAAAG GAGCTCCGTA
CTTGAATCTC CCGTTGGATC TCGGGGGCTA TCTAAATTTG CGGAAACTGC GACAGGGCCA
AGCCGGCGAT GGAGATGGTG CGGATAGTCA TGACGAGCTT TCTGATCCTT TGGATTCCAT
CGATATTCCC TTTCTTGCGT GTGGCGACTT GTCCGACTGG AGTCCATCCG GCGAGATCTT
GGATGCAGAC AAGAGCTACC CAATCGATGA GAGCCAGTAT ATTGCTCCTA TTGCGCCTCC
AATTCAACCC CCGTATCAAA CCAGCATGGA AAAACAAGCG GAAGACCGGC GTAAAAAGGT
GTGA
 
Protein sequence
MGRLSRDKRD VFYRLAKEKG YRARSAFKLL QVDAEFDIFG ARGAPASLGN TIEPLRVQRA 
VDLCAAPGSW SQVLSDKLYE LNHATGDAGA NSDQALDIDE QPEEPSIVAV DLQPMAPIDG
VLCLQGDITA QSTAQDIIKH FQGNRAELVV CDGAPDVTGL HDVDEYLQGQ LLLSAMMITT
HVLCERGTFV AKIFRGRNVG FLYAQLRLLF ERVSIAKPTS SRNSSMESFV VCQRFKGAPY
LNLPHDELSD PLDSIDIPFL ACGDLSDWSP SGEILDADKS YPIDESQYIA PIAPPIQPPY
QTSMEKQAED RRKKV