Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_17948 |
Symbol | NURF-55 |
ID | 7196597 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | - |
Start bp | 2437139 |
End bp | 2438830 |
Gene Length | 1692 bp |
Protein Length | 466 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | chromatin assembly factor subunit c |
Protein accession | XP_002177516 |
Protein GI | 219111529 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.446667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTTATACACG ACGTTTTGGT CCAGCTTATT GCACGTTTAC ACCACTCAGA GTCAATTAGT CTCACTTCCG CTACTCCTCC TAGTCAGCAG AATCATCATC ATCATCCACA TGACGCCTTC GACGACGGCT CCTGCTGCGG CATCGCATTC CTCTAAGAAC GGCACAACGT CGTCCTCCAA GACTCCTTTG CAAACCGACG TTTTGGAAGA ACGCTTGATA GACGCCGAGT ACAAGATTTG GAAAAAGAAC ACGCCCTTTC TCTACGATTT CGTCATGACG CACAGTCTCG AATGGCCATC CTTGACGACG CAGTGGCTTC CCAAGACGCA CACGGCGGGT CCCAACGCCA CGGAACATTC CTTACTCATC GGTACGCACA CCACCGGCGA ACAGAACTAT CTCATGATGG CGACCTGTGC TTTACCCAAG GAACAACCCG TGGTACCCGC CGATAGTAAC GACAACAACA ATAACAATTC CACGAAAGAT ACAACCGTCA AACAACCCGC ACCGCGTTAC GACGAAGAAA AGAACGAAAT CGGTGGCTTT GGCCTCGCCC ATTCCGCTGT AGGAAAAATT GACATCAAAG TCAAAATACA GCATCTGGGA GAAGTCAACC GGGCTCGTTA CATGCCACAG AACCATTTCA TTGTCGCTTC CCGCGGTCCC AATCCCGAAG TTTACATCTT TGACCTTTCC AAACACCCCT CCGTGCCGTC TCCGCAATCC ACCTTTTGCC CACAGGCTGT CTGTGTCGGA CACGCCAGTG AGGGCTACGG CATGGTTTGG TCCCCCCATC AAGCCGGTCT CCTCGCAACC GCCAGTGACG ATCAAACCGT CAAGGTGTGG GACGTGAACA CTGTACTCCA ATCTCCACCA AGTACCGGGA CGGACAGCGG TGGAATCCAA GTCGCCGCCC ATGCCACACT ATCGGCGCAT CAAGCGACCG TCGAAGACGT CGATTGGCAC GCACACGATC CCAACATGCT GGCATCCGTC GGTGACGATC AACTCCTCGC CATTTGGGAT TTGCGGGAAC CTTCGAAACC GCTACGCTCC AAACCCAACG CCCATGATCG GGACGTTAAC AGTGTCGCCT TTTGTCCGCA TGACGAGTAT CGACTCGCGA CCGGTAGTGC TGACCACGAC ATTGCCATTT GGGATTTGCG CAATCTCGAT ACGTACGTAC CACACCGTCC TACCGTCGCG TGAAGGGTGT CCAACATACA CACACACAAA CAGTCCATCG GCAGCGCCGT TTATCTGTAC TCCTCACAAT GCTCTGTTTA TTTCCTTGCA TGTACTTTAC TTCATATTTC TACCCTCCCA GTCGTCTCCA CACGCTAAAA TCGCACACGG ACGAAGTTTA CAACCTTTCT TGGGCCCCGC ACGCCGAAGG CGTACTCGCT TCATGCTCGG CCGACCGACG CGTGGGTGTC TGGGACTTGT CCCGCATCGG TATGGAGCAA AGCGTAGAAG ACGCCGAAGA CGGTCCGCCG GAACTGCTCT TTCTGCACGG AGGGCACACC AGTAAGGTTT CCGACTTTAG TTGGAACGTC AAAGATCCCT GGACCATTGC CAGTGTCGCC GAAGACAATA TCTTGCAGGT CTGGAAAATG GCCGAGGAAA TATATGTTTT GGAAAATGAA GAAGAACTTC CAGACGAATC GGACGAGGAA GACTTGGAAT AG
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Protein sequence | MTPSTTAPAA ASHSSKNGTT SSSKTPLQTD VLEERLIDAE YKIWKKNTPF LYDFVMTHSL EWPSLTTQWL PKTHTAGPNA TEHSLLIGTH TTGEQNYLMM ATCALPKEQP VVPADNTTVK QPAPRYDEEK NEIGGFGLAH SAVGKIDIKV KIQHLGEVNR ARYMPQNHFI VASRGPNPEV YIFDLSKHPS VPSPQSTFCP QAVCVGHASE GYGMVWSPHQ AGLLATASDD QTVKVWDVNT VLQSPPSTGT DSGGIQVAAH ATLSAHQATV EDVDWHAHDP NMLASVGDDQ LLAIWDLREP SKPLRSKPNA HDRDVNSVAF CPHDEYRLAT GSADHDIAIW DLRNLDTRLH TLKSHTDEVY NLSWAPHAEG VLASCSADRR VGVWDLSRIG MEQSVEDAED GPPELLFLHG GHTSKVSDFS WNVKDPWTIA SVAEDNILQV WKMAEEIYVL ENEEELPDES DEEDLE
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