Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_17728 |
Symbol | |
ID | 7196813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 1748345 |
End bp | 1750131 |
Gene Length | 1787 bp |
Protein Length | 509 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176843 |
Protein GI | 219110183 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.304466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTATCCCCAT CTAGTAGTAG CCCCAGCGTC AGTTCTCTCA AACTGGGAAC GAGAATTTGA AAGGTTTGCC CCTCATTTGA ATGTTGTAAA ATACCACGGG AGTATGAACG AACGTTCAGA GTTGCAAGAG GATCTACGCA TTTATTTACC AAGCAATCGA GCAGCTCGCA AAAAGCACAA AGTGACACCA CTAGACGTTA TACTAGTGCC CATCACCTAC TTTCAAAAAG AGAAATCGGA CGATCGCTCA TTTCTTCGTC GCTTCAACTA TCACTACATG GTGGTGGATG AAGCACATCT ACTAAAGAAT GCCAAAGGAC TGCGATACAA GTCACTGGAT CGCTTCACAA CGCTCCATAG ACTGTTATTG ACAGGTACAC CCGTTCAGAA TTCCCCCAAG GAGCTGATGT GTTTGTTATG CTTTCTCATG CCGTTGTTCT CGCGAAAGGG AGGAAGCGAT TTTGATGATG AACAAGGGAA TGATGGTGGA GAAAGTATGC TACAGCACTT CGTGTCGATG GAAGGAGGGA ACACTCTGCA TGACGAGACA GCGTACAAAA AGCTGAAGCA GCTATTTGCC CCCTTTGTCT TGAGACGTAG AAAGCAAGAT GTCCTTAGTC AGATCATGCC TCCAAAAGAG CACGCTGTGG AGATTGTGCA GCTTGACGAG TCGTCTCGTT GCCTCTACGA TAAAATCATT TCCGACCATA TTCGTTCCAA GAAAAAAGGC GACGCCTCGT CGAGAGAGCA TTTGTTTACT CAACTTCGAA AATGCGCTCA TCATCCGCTA CTTCTTCGAG CTCGGTATAC TTCTCCGACC GAGAAGGAAC ATTTGGCGAA ATGGTTTTAT CAGTACGGTG CCTTTCGTGG AGAAGGGTGT ACAATGGTCA AAGTTCGCGA GGAATTGGAT CGATTCAACG ACTTTGAAAT TCATTTGACT GCTTTAGAAT TGCTGGAGGA GAATCGACTT CGTCACGAGC AACTTGGTCG TTATGTTTTG CAAGAGAAAG ACTTGTTTTC TTCAGCAAAA TGCAAGCGGC TTCGGGCCAT TCTACCGGAT TTGGTTGGTA AAGGACACCG TATCTTAATT TTTTCCGTTT GGACAAGTTG CCTGGATCTG CTAAGTTGTT TGATGGAACA AATGGGTCTA GGGTATCTAC GTATGGAAGG CAGCACACCT GTCAACGAGC GACAGGCCCT GATCGATCGA TTTACGAGCG AGACCAGTAT TCCGGTTTTT CTGCTCTCCA CGAAGGCGTG TGGGTTGGGT ATCAATTTGA CTTGCGCGGA TACCTGCATT ATGCACGATC TCGACTTCAA TCCTTTCAAC GATTTGCAAG CGGAAGATCG TTGTCATCGT ATTGGGCAAA AGAAACCTGT CAAAATTATC AAAATGATAA CGGAGGATAC AGTTGACGAG GATATTTACA AAATGCAGCA ACGAAAGGCT CGAATGAATG CTGCCATCAT GGATACAGAT TCTAGGGAAT GGAACAACGT TGCCGCCAAT GAAAAGGGAA ACATGCTGAA ACATGCAGTG GATCGCTTTT TGCGTTCACC CACCCAGTCA AGGTCTTCGA AAGAAAGAGG TGACAAGGAA AATAGCGGCA ATATTGACAT GACGGATGTA TAAACTGTGC AGCAACACAG ACTGGATGCC AGAAAAAAGT GGCCAGTTCC ACTTTTTCTT TTTCAAATTG TACATAGCTT TCCGACAGCT ATTCAGTCAT CTCAATGGCA TGGCAGTCCA GTTAACTCGA GAAATATTTA GTCAGCTTTA TGAACCC
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Protein sequence | MNERSELQED LRIYLPSNRA ARKKHKVTPL DVILVPITYF QKEKSDDRSF LRRFNYHYMV VDEAHLLKNA KGLRYKSLDR FTTLHRLLLT GTPVQNSPKE LMCLLCFLMP LFSRKGGSDF DDEQGNDGGE SMLQHFVSME GGNTLHDETA YKKLKQLFAP FVLRRRKQDV LSQIMPPKEH AVEIVQLDES SRCLYDKIIS DHIRSKKKGD ASSREHLFTQ LRKCAHHPLL LRARYTSPTE KEHLAKWFYQ YGAFRGEGCT MVKVREELDR FNDFEIHLTA LELLEENRLR HEQLGRYVLQ EKDLFSSAKC KRLRAILPDL VGKGHRILIF SVWTSCLDLL SCLMEQMGLG YLRMEGSTPV NERQALIDRF TSETSIPVFL LSTKACGLGI NLTCADTCIM HDLDFNPFND LQAEDRCHRI GQKKPVKIIK MITEDTVDED IYKMQQRKAR MNAAIMDTDS REWNNVAANE KGNMLKHAVD RFLRSPTQSR SSKERGDKEN SGNIDMTDV
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