Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_1631 |
Symbol | |
ID | 7199669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | + |
Start bp | 953043 |
End bp | 954413 |
Gene Length | 1371 bp |
Protein Length | 448 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | cell surface receptor protein |
Protein accession | XP_002178881 |
Protein GI | 219116172 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.632649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCTGGTATCG AATTGTTCAA ATGTGTTTAC TCGATGATTC TCCTCGTCTT CTCCATAATT GTTGTCCTTG CCGCAATCTT CTCGGAACAA ACTGTGGCTA CTGGCGAAAA CAACGTCAAC CCTGTTCTTG CAGTCTTTCT TGTTTGTTTC CTCATCACGT GGCTCGCTAT GATGGAAGGT GGACAAGGAG CCCTCGTTGG CCTTCAACCC ATTGACAAGG AATTGTACGC TGTATCACAC CCACGGACGT ATGCATGCAC CAAACTCGCC CACCAAGGAA ACAATATGGA GCGTGTCATT GTAGGTCGTC AGTTCTTGGT GGTCTTGGTT GTTTTCGTCA CCAACTTGAT GGTGTCCTCT ATAGCAAATG CCTCGGTACT AAGCCTACCC GATGCTATCA ATGAAACATT TCTCGCCACC GGTCTCGCCG TGACACTGAC CGTAATCATC GTCGGACAAT TGACCGCACA GGTGAACGCG GCCAACTGCA TGCTTGACTT TATCAACAAT TACTTTATGC TTTTCACAAT ATACACGTCG CTGGTGATTG AAGCTTCTGG TCTTTTGCAT TCCGTGTATC TTGTTCAGAC CATTTTCTCA AAAATGTCTG GCACCCCTAT CGAGTCCAAC GAACCCTCAC GCAGCGTCTT CCAGAGTCTG CTGTTCTGGG GGCGTGTGGC TATGTCTCTG GTCCTTCTTG GCTTCTCTTT TGCCGTTTTG CTGACTGCAC TTTTCAACGG AAAGACTAAT ATGTGGGACG GCATTCCAGC AATTGCTTCC GTGATTATCT TCTTCATCTT GATGGCTGTA GTCGGTATCA TGGAAGGGAT GCAGATTGCT CTCTTCGCCG TCGTGAATCT CCCCAAAGAG GAACTCAGGA AGCATCCAAT TGCTTACGCC AACTGTGGAT TGACGTTCAG TGGCCAGAAC TTGCAGGCTT TCTTGATCGG TCGCCAGATA TGTGTTACCG TGTGTACGTT TGTGATAGCG CGTATCACTT CGGTGAGCGT CAACACTGAC ATTGGCGAGA ACAATGTTTT TGGAGTCAGT GACGGGATTC AGAACTTTTT CAACACGGGT ATGCTCGGAG CCCTAGTGAC AACGATAGTT GCGTCACTGG CGTGGCGTAT CATTGCCTCG TCACTCCCGG TAGCCTTTAT GTCCAATCCT CTCATCTACT TGATTATTCG TTTGTGTTTG ATACTGGAAG CGACTGGACT GTGCTCGGCC GCATGGGTAT TGGCATTGCT GCAAAAATCC CTTGCTGGCT ACCAAAGGGA CGATGTCTAC ATTGGCACCG CCGGCGAACG CGTCGTTTTC GCCAAGGACG GCAGCGAATT GCATCTCGAA GAGCAGAATT TGCGTGCATA A
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Protein sequence | SGIELFKCVY SMILLVFSII VVLAAIFSEQ TVATGENNVN PVLAVFLVCF LITWLAMMEG GQGALVGLQP IDKELYAVSH PRTYACTKLA HQGNNMERVI VGRQFLVVLV VFVTNLMVSS IANASVLSLP DAINETFLAT GLAVTLTVII VGQLTAQVNA ANCMLDFINN YFMLFTIYTS LVIEASGLLH SVYLVQTIFS KMSGTPIESN EPSRSVFQSL LFWGRVAMSL VLLGFSFAVL LTALFNGKTN MWDGIPAIAS VIIFFILMAV VGIMEGMQIA LFAVVNLPKE ELRKHPIAYA NCGLTFSGQN LQAFLIGRQI CVTVCTFVIA RITSVSVNTD IGENNVFGVS DGIQNFFNTG MLGALVTTIV ASLAWRIIAS SLPVAFMSNP LIYLIIRLCL ILEATGLCSA AWVLALLQKS LAGYQRDDVY IGTAGERVVF AKDGSELH
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