Gene PHATRDRAFT_16014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_16014 
Symbol 
ID7195769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011690 
Strand
Start bp71138 
End bp71737 
Gene Length600 bp 
Protein Length199 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184060 
Protein GI219127683 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.84524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGAGTGTGTC TGGACTGCTC GTTTGAAAAA GACATGACCG GTAAAGAAAT AGGGAGTCTG 
TCCTTGCAGC TTCGGTATTG TTACGGAATC AACAAAAGTA GTCCACACCC CTGTCTTTTG
TCTGCCACAG GCGTCGGGGG TGAAACGCTG ACTCACCTGC AGAAAGTATC GGGCTTTGAC
GAATGGTCGA ACCGAGCGTT TTCTTGTACG GAAAGGTCAT TGGAAGATTA CTATAGAGAT
AACATTTCGC AGATTGTTTA CCTTACCAGT GACTCGCAAA ATGTCCTGGA GGATTTGGAC
AACGAGAAAA TCTACATTAT TGGAGGGATT GTGGACCGGA ACCGACTGAG ACGAGCAGCC
ATTGATCGCG CTGAGAGACT CGGTGTTGCA ACGGCAAGAT TACCATTAGA CAAACATCTT
AAAGAGATGG CTTCGACTCG TGTGTTGACA TGCAATCACG TGTTTGAGAT ACTCATAAAG
TTTAGAGAGC ATGGTAAGAG CTGGAAGAAG GCTTTGCATG ACGTGTTGCC GCAGCGAAAA
GAAGCAAAAC TGATGGATGG CGAAGACAGA GAAGCTATTG AAGTGAAGGA AATTAAATAA
 
Protein sequence
RVCLDCSFEK DMTGKEIGSL SLQLRYCYGI NKSSPHPCLL SATGVGGETL THLQKVSGFD 
EWSNRAFSCT ERSLEDYYRD NISQIVYLTS DSQNVLEDLD NEKIYIIGGI VDRNRLRRAA
IDRAERLGVA TARLPLDKHL KEMASTRVLT CNHVFEILIK FREHGKSWKK ALHDVLPQRK
EAKLMDGEDR EAIEVKEIK