| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_1550 |
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| Symbol | APC6 |
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| ID | 7196023 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | + |
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| Start bp | 784481 |
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| End bp | 785935 |
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| Gene Length | 1455 bp |
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| Protein Length | 381 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002176654 |
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| Protein GI | 219109801 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.058598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | CGTGGAGAGG CACGTTCTCA GTTGGGTGAC GGCTCCCGAG CTGCTGTTTT TTGGAAACTA
GCCCTTCGTC TTGATGCGGC ATGTCAGGCT GCATGGAATA GGTTACAAGA TTTTCATCTT
TTGACGTCAT CCGAATGCCA TGACCTTGTT TTGAGCTTAC ATTTCGGAGA GAAGGCGTGG
TTGCGGGATT TGTACATGGC CAGCATCGCG CTTACACCTC AGGATACAGA GAAGCCAGAT
ACCGAAGGCT CAGGACCGTC ATGCGACGCC ACGGACACTT ACAAATTTAT CCCACAAAAT
AATGCGGCGA ATTCCTCCTT TACTATGCAT GGCGCTGGGA ACTTGGACGC AAGCTCTATT
CAGTTAGCTT CTCCAATTTT CACGTTTCCT ACGTCTACCA ACGCGACGAC GTCCAAGCCT
ACCGCTGACG ATTCGTGGAA ACCGGGCACG GGGATCTCCA AGATCCAGCA AGACGTCGAT
CATGCTTTCC GCAAGCTCTG GAGCGACTAC AAACTAAATC ATTCACCCCA AGTTCTGGCC
ATGGCAGCCC GGCGTGCATA TCGCCAGTAC GATTGGTCTG GGGCGCTCAA GCACTGCCAA
GCGTTGGCAG TGCTAGACCC GTCAATGGCC GGCGCCGCTT ACTGCTACGT AGCCACGCTC
GTAATTCTTG GGCACAAGCG TGTTTTGTTC CGTCTCGCCC ACGAATGGGT CGACGCCAAC
CCTAAAGCGG CCTGTGCCTG GTTTGCTGTC GGTGCTTACT ACTTCTGCTG CGAGCGTTAT
CATGTCGCAC AGCGCCATTT TTGTCGGGCG ACGCGCCTCG ATTCGTCTTG TGCAGAGGCG
TGGATTGCCT TTGGCTGTGC CTTTTCAGCT TGCGATGAAT CTGACCAAGC ACTGGCATCC
TATCGAGCCG CCCACCGTCT TAGCCCTGGG GAGCATACGT CGCTATTGTA CATGGGAATG
GAGTACGCTC GAACCAATCA CAAAGTCTTG GCAGAATATT TTTTACAATC GGCCTGGGCA
TCGAGCGGTG GTGATCCGCT GTGTTCGCAT GAATTGGGAG TATTGTATGC ACAGAAAGGT
CAACACGAAA AAGCAGTTTT TTGGTTTCAC CGGACGTTGC GAGTGGTTGT GGCTACTACA
AGCGGTGGGA ATGAAGAAGA CATCAAACGG TCTCGGTCCA TGCAGGAGTG TTTGGACCTT
TGTCAGGATC CCTACTGGGA GGCGACTCTG TATAGCTTAG GACACTCGTA CCGCAAGATG
CGACAGTATG AAGTGGCAGC CTCTTGTTTC GATCGATGTA CCGCATTGTG TCCCATGAAG
TTCTCAACAT ACTCTGCCCT TGGTTTAACA AAGCACTTGA ATGGTGATGT GGATGGCGCT
ATTGACCTCT ACCATAAGGC GCTATGCTAT CGACCGGACG ATTCTTTTAG TACAGAGATG
TTAAAAAGAG CTTTG
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| Protein sequence | RGEARSQLGD GSRAAVFWKL ALRLDAACQA AWNRLQDFHL LTSSECHDLV LSLHFGEKAW
LRDLYMASIA LTPQDTEKPD TEGSGPDYKL NHSPQVLAMA ARRAYRQYDW SGALKHCQAL
AVLDPSMAGA AYCYVATLVI LGHKRVLFRL AHEWVDANPK AACAWFAVGA YYFCCERYHV
AQRHFCRATR LDSSCAEAWI AFGCAFSACD ESDQALASYR AAHRLSPGEH TSLLYMGMEY
ARTNHKVLAE YFLQSAWASS GGDPLCSHEL GVLYAQKGQH EKAVFWFHRT LRCLDLCQDP
YWEATLYSLG HSYRKMRQYE VAASCFDRCT ALCPMKFSTY SALGLTKHLN GDVDGAIDLY
HKALCYRPDD SFSTEMLKRA L
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