| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_15374 |
|---|
| Symbol | |
|---|
| ID | 7195071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011687 |
|---|
| Strand | - |
|---|
| Start bp | 307507 |
|---|
| End bp | 308835 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183462 |
|---|
| Protein GI | 219126433 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CAGGCTCGGA GTGCCTCCAG CGACACATCC GAAGCAGCTG AGCAAATTGC GAATCTGTCG
GAAGATCGAG TCAAGCTCAT TCAAGAGCGT GACGGGTTTT TGAATCAACG GAAGGAAGCT
TCCGCTGTTG TCGGCAAACT CATGCGTAAC AAGGACAATT TAGACTCATC CCAACAGGAG
GAATTGGAAG AGGCGAAAAG TGCCAGTACA GCAGCGTCTG AAAAGGCTAC TAACGCTGAA
GCTGCTTTGG AAGAAATCCA AACTACCATG GATCGACTAC TGGCAGGTAT TCCCAACCTA
CTGGACGATC AAGTTCCCTT TGGAAGGGAC GAATCTGAAA ACGAAGAAGT TAGCCGATGG
GGTGATAAAG ATGCCCTCCC AGCAAGATTG GAATGGGACG ATTCTTTTCA GCCGCTGTGG
CACGACGATG TAGCTTCCAA TTTAAACGGC TACCAGGTCG AAGCCGCTGT CAAAATGTCG
GGTGCCCGCT TCGTTGCCTT ATCCGGATCC ATCGCCCAAC TCGAACGCGC AATTGCCATG
TTTTGTATCG ACCTCCATAC CACGCAGCAC GGCTATACCG AAGTATCCGT CCCGTTTGTG
GTCGGTCGCT CCGCTCTCGA GGGCACATCG CAGTTACCCA AATTTCAGGA AGACTTGTTC
GCCATTACGC CGGAATCGCA TACGTGCAAC GGCGAGGATG CCTTTTTGAT TCCCACCGCC
GAGGTGCCCG TCACCAACAT GCATCGAGGG CAGGTTTTGG AGGAAAGTGA TCTGCCTCTT
TCGTACGTGG CCTGGACTCC CTGCTTTCGC GCCGAAGCCG GAAGTTACGG TCGGGATACC
AAAGGTTTAA TTCGAACGCA CCAGTTCCAA AAGGTGGAAC TGGTCAAAAT CACAACGGCC
GACACGTCCG ATGCGGAACA CGAAACGCTG ACGGCGCACG CGGAAGCAGT CCTGCGGTCG
TTGGAATTGC CGTACCGCAA AGTACGTTTG TGCTCCGGAG ATATTGGATT TTCAGCCCGA
CATTGCTACG ACTTGGAGGT GTGGTTGCCC GGGGCTGGTG AGTTCCGTGA AATTTCGTCC
TGCAGTAACA CGGGCGACTT TCAAGCGCGT CGCATGAGTT TGCGGTATCG CCCCAAGCCA
GCAGATGGCT CGAACAAGAA ACTCAAGCCG GTATTATGTC ATACGATAAA CGGTAGCGGT
TTGGCGGTGG GTCGTACTCT GGTAGCCGTT TTGGAAAACT ACCAAACGCC GGATGGTTCG
GTGGTCGTTC CCGAAGTCTT GCGGCCATAC ATGGGCGGCA AAGAAATCCT CAAAGCTCCC
CAGAAATAG
|
|---|
| Protein sequence | QARSASSDTS EAAEQIANLS EDRVKLIQER DGFLNQRKEA SAVVGKLMRN KDNLDSSQQE
ELEEAKSAST AASEKATNAE AALEEIQTTM DRLLAGIPNL LDDQVPFGRD ESENEEVSRW
GDKDALPARL EWDDSFQPLW HDDVASNLNG YQVEAAVKMS GARFVALSGS IAQLERAIAM
FCIDLHTTQH GYTEVSVPFV VGRSALEGTS QLPKFQEDLF AITPESHTCN GEDAFLIPTA
EVPVTNMHRG QVLEESDLPL SYVAWTPCFR AEAGSYGRDT KGLIRTHQFQ KVELVKITTA
DTSDAEHETL TAHAEAVLRS LELPYRKVRL CSGDIGFSAR HCYDLEVWLP GAGEFREISS
CSNTGDFQAR RMSLRYRPKP ADGSNKKLKP VLCHTINGSG LAVGRTLVAV LENYQTPDGS
VVVPEVLRPY MGGKEILKAP QK
|
|---|
| |