Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_1469 |
Symbol | |
ID | 7201550 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | + |
Start bp | 374026 |
End bp | 375186 |
Gene Length | 1161 bp |
Protein Length | 354 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | 2-hydroxyacid dehydrogenase |
Protein accession | XP_002180815 |
Protein GI | 219120140 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GATCTTGAGT ATTTTTACCT GCCAATCATT TTCAAATCAC ATGTCACGGG GTTCGAGCCG ACGAAGGATT TATTTTTGGA ACAAGGGAAT ATTGTTGCAG GCCAGTATCT TGTGGAAGGT GAACTTGGAA GCGCGGCTTT CAGTACGGCC TACCGATGCA CTGACTTGAA TTCTGATCAA GATAGCGACG GCGAACACGA AGAAGTTTGC CTGAAAGTGA TCAAGAACAC AAAGGATTTT TTTGACCAAT CGTTGGACGA AATCAAAATA TTGGAATTAT TGCGACAGAC TGGAAAGTGC AATGAGAATC ATCTTATCGA GATGAAGACA TTTTTCTACC ACAGAGAGCA TCTTATCATT GTGACAGAAC TTCTTCGACA AAATCTCTTC GAGTTCGGCA AGTTCATTAT TGAGGACAAC GAAGAGCCGT ACTTCACCAT GAATCGACTT GCCTACATCA CTCGGCAATG TCTTACTGCT CTACGCTTCG TTCATAATCT TGGCCTAGTT CACTCAGATG TGAAGCCGGA AAATATCCTT CTGGCAAGCT ACAGCCGCGC GCAGATTAAG CTGATCGATT TTGGAAGTTC ATGCTACCTC ACGGATCGGC AATCGTCATA TATACAATCG AGGTCCTACC GCGCACCCGA AGTGGTGCTG GGCCTACCCT ACGATGGACG CATCGACATT TGGTCGTTGG GCTGTGTTGT TGCTGAAATG TACACGGGGG AGGTGACCTT CCAGAATGAC TCGATCGTTT CCATGTTGAG TCGAATTGAA GCTATATGCG GCGCATTTCC CTACCATATG ATTGTACAGG GACGGCAAAG CGAAAATTTC TTTACCAAGC GTGGTCTTTT ATTTGAAAGT CTCAGCGAGG AAGAAGAAAC AAATAATGAT AGCCACCATT CGGACAAGGG CGAGCAAAAC GTTGGCCGCA AGATCGACAT ATTCCAGCCC AAAGCGACTA CTTTGGCCTC GCGTCTGGGA TTCACGTCCG ATTTATTGGA AAAGCTCGAT AACGGCAAGA CGCTGTCCAA AGACCTGACT CGACAAGCCA TGTTTGTAGA TTTTGTTCGA AAACTTCTAA CGATCGACCC CGAAGTTCGT CCAACAGCTG GTCAGGCTTT GGAGCACCCT TGGATGAAAT ATGCTTCAGC A
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Protein sequence | DLEYFYLPII FKSHVTGFEP TKDLFLEQGN IVAGQYLVEG ELGSAAFSTA YRCTDLNSDQ DSDGEHEEVC LKVIKNTKDF FDQSLDEIKI LELLRQTGKC NENHLIEMKT FFYHREHLII VTELLRQNLF EFGKFIIEDN EEPYFTMNRL AYITRQCLTA LRFVHNLGLV HSDVKPENIL LASYSRAQIK LIDFGSSCYL TDRQSSYIQS RSYRAPEVVL GLPYDGRIDI WSLGCVVAEM YTGEVTFQND SIVSMLSRIE AICGAFPYHM IVQGRQSENF FTKRGLLFES LSEEEETNND SHHSDKGEQN TLSKDLTRQA MFVDFVRKLL TIDPEVRPTA GQALEHPWMK YASA
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