Gene PHATRDRAFT_13820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_13820 
Symbol 
ID7202136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp313837 
End bp314682 
Gene Length846 bp 
Protein Length282 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181181 
Protein GI219121662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCCT CGGAAGAACG ACGTACTCTT GCCGACATTA TTCTCGAAAA AATAGAAGAA 
AAGGAAGCCG AAAAACGCGG CGAGGTCGTG GCCGAGGATG AAGGAATCAC CCTGCCACCT
AAAGTCATAG AGGTTTATAC GGACATTGGA AAGATCTTGG GACGATACAC TTCCGGTAAA
CTCCCCAAAG CATTCAAAGT AATCCCGAGT TTATCGAATT GGGAGGAAGT GCTGTATTTG
ACTCGGCCAG ATAAGTGGAC GCCTCAGGCC ATGTTTCAAG CCACTCGTAT TTTTGCCTCC
AACTTGAACC CTAAGATGGC GCAGCGCTTT TACAACCTGG TTTTGCTGGA CGCAGTCCGG
GCCGATATTC AATCCAGCAA GAAATTGAAC TATCACTACT ACATGAGTCT GAAAAAGAGT
GTATACAAGC CAGCAGCCTT TTTCAAGGGA ATCCTTTTAC CTTTGCTGCA AGACAACTGT
ACGCTCCGAG AAGCTGCCAT TGTAGCATCG GCATTACAGC GGGTGTCCAT TCCGTCACAT
CATTCTGCCG TTGCCATTCA CAAGCTAGCT GGTCTGGAGT ACTCGGGAGC CTCTTCGATT
TTCATCAAGA CTCTGTTGAA CAAAAAGTAT TCGCTGCCGG CGCCAGTAAT CGGTAGCCTT
GTGCGACACT ATGCGAGCTT TATAGAAGAC GAGCGGCAGA TGCCCGTACT GTGGCATCAG
TCACTGCTCG TTTTTGTGCA ACGTTACAAA AACGAAATCA AGGATGAAGC CCGCGAGTCG
TTACGACTGG TCATGAAGAA GCATTTCCAT CCCAAAATTA CCCCCGAAAT CCGAAGGGAA
CTATTC
 
Protein sequence
MNPSEERRTL ADIILEKIEE KEAEKRGEVV AEDEGITLPP KVIEVYTDIG KILGRYTSGK 
LPKAFKVIPS LSNWEEVLYL TRPDKWTPQA MFQATRIFAS NLNPKMAQRF YNLVLLDAVR
ADIQSSKKLN YHYYMSLKKS VYKPAAFFKG ILLPLLQDNC TLREAAIVAS ALQRVSIPSH
HSAVAIHKLA GLEYSGASSI FIKTLLNKKY SLPAPVIGSL VRHYASFIED ERQMPVLWHQ
SLLVFVQRYK NEIKDEARES LRLVMKKHFH PKITPEIRRE LF