Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_13557 |
Symbol | |
ID | 7202099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | - |
Start bp | 137089 |
End bp | 137769 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | proly 4-hydroxylase |
Protein accession | XP_002181308 |
Protein GI | 219121927 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.428415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGTG CTGTCACTTT AGAAACCCTA TCACTTGTGC CGCTCGTCTT GTCCGTCGAA GGATTTCTTT CGGATGATGA GTGCACCTAC ATTCAGGAAA CTGCCGAGCC TCACATGGAG TATTCCGAGG TCACACTCAT GGACAAAGAC CAAGGTCGAC CGGCATCAGA TTTTCGGACT TCCCAAAGTG CTTTCATTCG AGCCCACGAT GACGCAATAC TTACGGATAT TGATTACCGG ACTGCGAGTC TCGTTCGTAT ACCACGTAGA CACCAGGAAG ATGTACAGGT CCTGCGCTAC GATGTAACCG AGAAATACGA TTCGCACGCT GATTATTTTG ATCCAGCGCT CTACACGAAA GACAAGCGAA CATTAGCGCT CATTAGAAAC GGGCATCGTA ACCGCATGGC AACCGTGTTC TGGTACTTGA GTGATGTAGA AAAAGGAGGC GAAACGGTCT TTCCTCGCTT CAATGGGGCA CAAGAGACAA GCATGAAAGA TTGTAAAACT GGGCTCAAGG TCAAACCAGA AAAAGGTAAA GTCATCATAT TTTACAGCAT GACACCCGAT GGTGCATTAG ATGAATACAG CTTGCACGGT GCTTGCCCTG TCCAAAAAGG CACCAAGTGG GCGGCTAACA AATGGGTCTG GAATGAGCCA ATGCAATTCG TTCCTTCGTA G
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Protein sequence | MSRAVTLETL SLVPLVLSVE GFLSDDECTY IQETAEPHME YSEVTLMDKD QGRPASDFRT SQSAFIRAHD DAILTDIDYR TASLVRIPRR HQEDVQVLRY DVTEKYDSHA DYFDPALYTK DKRTLALIRN GHRNRMATVF WYLSDVEKGG ETVFPRFNGA QETSMKDCKT GLKVKPEKGK VIIFYSMTPD GALDEYSLHG ACPVQKGTKW AANKWVWNEP MQFVPS
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