Gene PHATRDRAFT_13553 details

Gene Information

• Locus tag: PHATRDRAFT_13553
• ID: 7202236
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011680
• Strand: -
• Start bp: 149351
• End bp: 150103
• Gene Length: 753 bp
• Protein Length: 250 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002181311
• Protein GI: 219121934

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0118726
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGTTCG TGCTATCATT CTACTGGACG GCGCAAGTTG GCAAGAATAT TCTCCATGTC 
ACTGTATCGG GTGTTGTTGG TACTTGGTGG TTTGCTCCTG AGGATGCTAG TAGCTTTTGC 
TCCCCTGCAA TCAACGATTC ACTGTTGCGA GCTACAACTT ATTCTCTTGG AAGTATTTGT 
TTAGGTAGCC TCTTGACGGC ATTACTGCAA TTTGCTTGTC AATTGACGAG AGAAGCCAGA 
CGTCACACGC GATGCAACGC AATACTCCGT TGTGTTCTTG AGTGTCTCGT GGATTTTCTC 
GAACGGCTTG TGGCATACTT TAACCAGTGG GCTTACGTGT ACGTCGGTCT CTACGGGTAC 
GACTACTTAA CAGCGGGTCG CAGGACGATG TCTCTCTTTA TGGAACGAGG ATGGACAATC 
ATCATCAACG ATAATCTTGT CCTCAGAGTA CTTGGTTTAA TGAGCGTGTT GATGGGTTTC 
CTCACGGGAT GTTTCGGACT CATCATAGCT TCGATCAAGT CCTCTTGGCT AGAGGATTTT 
GGAAACTCTG CAGCCTCCGT CGCCTTTTGC ATTCCGTTTC TTATCGGAGC CGCGGTGGCG 
TATGCTTTGA TGAGTGTGGT CGCCTCCGCC ATCGATACGG TTCTTGTTGC TTTCGCGGAA 
GGTCCTTTAG ATTTTGAAAG GAACCATCCT GGTCTATATA CACAAATGAT TACTGCATGG 
CGTCAAGTCT ACCCCGAAGA ATTTGGAATG TAG 

 

Protein sequence

MMFVLSFYWT AQVGKNILHV TVSGVVGTWW FAPEDASSFC SPAINDSLLR ATTYSLGSIC 
LGSLLTALLQ FACQLTREAR RHTRCNAILR CVLECLVDFL ERLVAYFNQW AYVYVGLYGY 
DYLTAGRRTM SLFMERGWTI IINDNLVLRV LGLMSVLMGF LTGCFGLIIA SIKSSWLEDF 
GNSAASVAFC IPFLIGAAVA YALMSVVASA IDTVLVAFAE GPLDFERNHP GLYTQMITAW 
RQVYPEEFGM