Gene PHATRDRAFT_13208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_13208 
Symbol 
ID7201696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011678 
Strand
Start bp690557 
End bp690991 
Gene Length435 bp 
Protein Length145 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181055 
Protein GI219120642 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0144324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGACA AGGGTTCCAT TGTAATCCGC CAGGCAACTC AAGAAGACTT GGACGTCGTG 
TACAACCTGA TTCGCGAAAA GGCTGCCTTT GACCAATCGC TTGGTGACAG CCAAACCGTC
GTCCTAGTCA CTCTGGACAG TCTAAGGGGC ACACTCTTTA ACGAAAATCC TTATGCACAC
CTCCTGCTAG CGACTTCCGA TGACCGTATC CTAGGCTTGG CGCTCTACCA TTTTTGTTTC
TCATCATTCC GCGGACAGCC GAGTCTGTGG TTGGATGACC TGTTTGTTCG CGAAACCTAT
CGTAACCAAG GCACCGGACT CGCTTTCATG CACGAATTGG CGGCTGTGGC ACACACCCAC
GGTTGCTCAC ACTTGTCCTG GACGGCCCAC GCACGTAACA CGCGCGGCTT GGTGTTCTAT
GCCCGAATCG GCGCC
 
Protein sequence
MLDKGSIVIR QATQEDLDVV YNLIREKAAF DQSLGDSQTV VLVTLDSLRG TLFNENPYAH 
LLLATSDDRI LGLALYHFCF SSFRGQPSLW LDDLFVRETY RNQGTGLAFM HELAAVAHTH
GCSHLSWTAH ARNTRGLVFY ARIGA