Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_13174 |
Symbol | |
ID | 7201607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | + |
Start bp | 635359 |
End bp | 636189 |
Gene Length | 831 bp |
Protein Length | 277 aa |
Translation table | |
GC content | 57% |
IMG OID | |
Product | l-ascorbate peroxidase |
Protein accession | XP_002180872 |
Protein GI | 219120259 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.124324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAACG CTCACTACGC TGACGAGTTC TACGACAATG CGGCACGCGC CGAAGTCTCC CGGGCTATTG TGAACAAGAA GGTGAACGTC TGTCCCTTCA CGGTTCGTCT CGCGTGGCAC GCGTCGGGCA CCTTTGACCA GAGCGATGCC AGTGGTGGCA GCGACGGTGC CCGCATGCGT TACGCCCCGG AGCTTTCCGA CGGTGCCAAT GCGGGTCTCG CTCTCATGCA GGACATTATC AAACCCGTCA AGGAAAAGTT CCCGGACATG TCCTACGCCG ATCTCTGGAC CATGGCGGGA ACGCAAGCGA TCAAGCTAAC GGGAGGACCG GACATTCCGT TCAACTACGG ACGGACCGAC GATGCGGACA ACAACAAGTG TCCGGCCAAC GGACGTCTAC CGGACGCGAC GCAAGGCGCT GAGCACCTGC GAGATGTCTT TTATCGTATG GGCTTTGGTG ATAAGGAGAT CGTTGCCCTG TCCGGAGCGC ACACCCTCGG ATCGTGCCAC CGTTTGCGCT CTGGTTTCGA CGGACCCTGG ACCACGAACC CCCTCAAGTT CGACAATGAG TACTTTAAGA ATCTGCTCGA GATCGATTGG AAGCCTCGCG AGTGGGAAGG TCCCTTGCAG TACCAGGATC CTTCCGGAAA ACTCATGATG TTGCCCACCG ATATGGCACT CATTCAGGAC GAAGCGTTTT TGCCTTTTGT CAAAAAGTAC GCCGAAGACG AGCAAGCCTT CTTTGCTGAT TTTGCCGAAG CTTTTGCTGC TTTGATCTCC AAGGGATGCC CCGCGCACTG TCAGCCCAAT GCTGAGCGTC AGGCTCCCCA A
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Protein sequence | MANAHYADEF YDNAARAEVS RAIVNKKVNV CPFTVRLAWH ASGTFDQSDA SGGSDGARMR YAPELSDGAN AGLALMQDII KPVKEKFPDM SYADLWTMAG TQAIKLTGGP DIPFNYGRTD DADNNKCPAN GRLPDATQGA EHLRDVFYRM GFGDKEIVAL SGAHTLGSCH RLRSGFDGPW TTNPLKFDNE YFKNLLEIDW KPREWEGPLQ YQDPSGKLMM LPTDMALIQD EAFLPFVKKY AEDEQAFFAD FAEAFAALIS KGCPAHCQPN AERQAPQ
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