Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_13004 |
Symbol | |
ID | 7201762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011678 |
Strand | + |
Start bp | 164999 |
End bp | 165514 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180768 |
Protein GI | 219120041 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00979759 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAGCT CTTGCCTCTT ACCCGCTTCA GGATTTCACG AGCGCCAGAA ACTTGCTATG TGTGCTGTTC ATGCAATAAA TAACATTGTT CAGTCATCCA AGTACTCCAA AACAGATTTT GATTCGATTT GTGAACAGTT GTCGCCCTTA ATATGGTTCA ATCCGCATCG AAGCGCTTTC AGCATAGGAA ATTACGACGT GAATGTTGTT TTGCTGGTTT TACAAGCAGA GAATTGTTCT GTCCTCTGGC ACGATAGACG AGGACTAGTC ACTACACACG ATCTGGATAT CCACGATGCT ATTCTCTGGA ATGTTCGTTC AGAGACGTGG TTGGGGCGCA TCGCTGGCTG GAGACATTGG ATTGCACTCC GGGTACGTGA CGGTTGTTGG ACGAATTATG ATTCCCTTTT CACAGAACCA CAAGATATTG GGAACAGCAA GCAATGCGCA GCTTTACTCA ATTCCGAAAA AGATGGACAT GTTCTGCTCA TACATTTCCC GTGTACCGAG GATTAG
|
Protein sequence | MSSSCLLPAS GFHERQKLAM CAVHAINNIV QSSKYSKTDF DSICEQLSPL IWFNPHRSAF SIGNYDVNVV LLVLQAENCS VLWHDRRGLV TTHDLDIHDA ILWNVRSETW LGRIAGWRHW IALRVRDGCW TNYDSLFTEP QDIGNSKQCA ALLNSEKDGH VLLIHFPCTE D
|
| |