Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12940 |
Symbol | |
ID | 7201487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | - |
Start bp | 820721 |
End bp | 821320 |
Gene Length | 600 bp |
Protein Length | 200 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180713 |
Protein GI | 219119925 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTTGCTACC AAGATCGTTG GGTCTGCGTC AACAAACCCG CGGGTATGTC AACGCATCGT AGCGGAGGCA ATAGAAGCAA CCAGTTCGTT GTCTCGACAC TTCTCAAACG CCAACTGTCA CGCAAAGTTT TTCCGGTTCA TCGACTTGAT CATCGGACCT CTGGAGCGCT TTTGTTTGCC TTCGACTCAG AAATGTGTGC TTCCCTTCAC GATGCACTTC GTGAACAGTC TGCCCGCAAA ACGTATGTCT GCCTTGTTCG AGGCTTTTGG GACAATTTCT TCGAGAGTGA TACCGCAACT GTGGACAAGG CTCTCACCGT AGACGGCACC AAACGCAGCG CTACTACGGT ATTTACCAAA TTGGCCAGTA CCATTATTCT TAACAACTCA GCTTACGGTG AAAAGAACGT GCCAATTTCG TGTAGCCTCA TCTTGGCTGT TCCAACCACC GGTCGAACCC ATCAAATTCG ACGTCACGCC AGTGCTATGG GAATGCCTGT ACTGGGCGAT ACACAACACG GAGAAACAAA AGTCAACCGA TGGTGGAGAC AGAAAAGGGG GCTTGACAGG CTAGCGCTGC ACTGTCTATC TCTGAACTTG
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Protein sequence | LCYQDRWVCV NKPAGMSTHR SGGNRSNQFV VSTLLKRQLS RKVFPVHRLD HRTSGALLFA FDSEMCASLH DALREQSARK TYVCLVRGFW DNFFESDTAT VDKALTVDGT KRSATTVFTK LASTIILNNS AYGEKNVPIS CSLILAVPTT GRTHQIRRHA SAMGMPVLGD TQHGETKVNR WWRQKRGLDR LALHCLSLNL
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