Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12863 |
Symbol | |
ID | 7201530 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | + |
Start bp | 79865 |
End bp | 80596 |
Gene Length | 732 bp |
Protein Length | 212 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180372 |
Protein GI | 219119214 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CAGTATCTTT CCCGTTTGAC CGATGTGCAG CAAATGGACA TTCAGTCCGC CTTGGATCAA ATGAAATCTC TCCTCTCCAC GCGTCCGCAA CTCGTTTACA AGACTGCCTA CTATCGAAAG CAAACCAAGA ACCATTGGGC CCGGGATGAC CCCGCCTTTG TGGCCTTGCA GGCTGTCTTT CTATTGATTG CCTGTATCGC CTATGCCGTT TCCTTCCGCA TCTCGGTGAC CGACACGATT TCCTTTTTGC TATACAACGC TCTATGGAAT TGGCTGGGTA TGGGGTTTAT TCTGGCATCA CTTTGTAGGG AAATTGCCAA TCGACACTTG ACACTTCATC AATCCAACAG TCACGTCCGA CAACAAGTGG AATTGCTTTA TGCGTTTGAT ATCCACTGCA ACGCGTTCTT CCCGGTTTTT GTGGTGCTTT GTAAGTAAAT AAGGAGCTTG CTTTTCCTTT CATAGTGTTT GTTGGATTGT TGCTCATTCT CACTGTTGTT GAATTTGGTG CACCACTCGC TGCTAGACGG AATACAGTTC TTTTTATTAC CGTTCGTTCT AGCCGAAGGA CTCTTTGCGC TGCTTCTCGC AAACACGTTA TACGCAGCCG CTTTGAGTTG GTACTGGTAC ATTACCCATT TGGGTTACCG TACCCTACCG TTTCTGTCAA ACACCGAGGT TTTTCTTTTC CCCATTGCCG CCATTGTGTT GTTATACACC GTTATGATTG TC
|
Protein sequence | QYLSRLTDVQ QMDIQSALDQ MKSLLSTRPQ LVYKTAYYRK QTKNHWARDD PAFVALQAVF LLIACIAYAV SFRISVTDTI SFLLYNALWN WLGMGFILAS LCREIANRHL TLHQSNSHVR QQVELLYAFD IHCNAFFPVF VVLYGIQFFL LPFVLAEGLF ALLLANTLYA AALSWYWYIT HLGYRTLPFL SNTEVFLFPI AAIVLLYTVM IV
|
| |