Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12587 |
Symbol | |
ID | 7201371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | + |
Start bp | 451066 |
End bp | 452919 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180437 |
Protein GI | 219119349 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.091239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCCGGCGTCG CGCCCGAGTT GTACGAAGGC GCCGAAACGG TCTTTATGTT CACCGACTTG GTGCAGTCCA AAAAGACGCA CGTTCCGTTC GAATTCTACG ATTTGCCCTC CTGCGATGCC CCCGTCATGA ACAACTTTCG CCGCAAGCAC AAGACGCAAC GCAAGAACCT CGGAGCGCGC TTGCAAGGCG TAGAACTCAA GCCCGCACCC TACGTTCTCA AGATACTGCA GAACATCAAC TGCATGACTT TGTGTGAACG AAATTTGGGA TTCCGTGAGG TCAAGAGTCT ACGCAAACTT GTGGAACGAC AGTATCGCGT GCACTTTACC TTTGATCAGC TCCCCGTACT CATGCGCTCC TCGGAACTCA ACTACGCCGT GCGCGGGTAT CCCGTCGGCT TCAAGGCACC ACCTTCCTAC ACCGGTCTCG ATCACGATGA ATTCTATCTA TACAATCATC TCAAGTTCAC TATTACCTAC CAGCCAGGAC AAGGCGACGA GAGCAGTGGT GTATACATTA CCGGGTTCGA TGTCCATCCC GTATCGATTC GGCACGGGCC GGATACCTGC AGCAACGACG AAGAGGACGG TGGTCCCATC AACGATCCGT CGTCGTACTT GCCCCTCACC ATGACAACAT CGGGGCAGAA GAACACGGTC GCCTACTCTT ATTCCGTCGA ATGGATTGAG TCAGCTTTAC CCTGGGCCGA TCGTTGGGAC GTCTATCTCA TCGGAAGCCC GGACGATGAC ATTCACTTTT TTGCCATTGT CAATTCACTC ATGATCGTCC TCTTCTTGAC TGGAGCGATT GCTACGATTA TGATTCGTAC CCTCAAGAAG GATATTTCGA GTTACAACGA AATGTCCATG CTCGAAGACG GCGGGGCTGA AGAAACGGGA TGGAAACTGG TACACGGAGA CGTCTTTCGT CCACCGTCCA CGTCGCCGAT GGCCTTGTCG GTTTTGGTCG GAACCGGTGC GCAAATCGGA ACCGCCTTTT TCATCTCCAT GCTTTCGGCG GTATTCAAAT TACTCAACCC CATGAGAAAA GGACAAACTC TTACTGCCAT TCTCATTCTC TACGTGCTTT GCGGATCCGT TGGTGGCTAC GTGTCGGCCC GCATTTACAA ATTTTGTGAT GCCAAGGCTT GGAAAATGAA CGCCATCTTG ACGGCTACCG CCTTACCCGG AACCCTCGTT TCCATCTTTA CCGTACTCAA TATATTTTTG AGTATTGCCG GAGCCGCCAC GGCCGTTTCC TTTTGGGTTT TGTTGGCTCT CTTTCTCTTG TGGACGTGCG TTTCTGCGCC ATTGGTTTTC GTCGGCTCCT TTTTTGGTTT GAAGCAGGGC AAAATTGAAA TTCCTAGCCG CGTCAATCAA ATTGCTCGGG TCGTCCCACC CTTGCCCTGG TATAGTTCGC CTCCCATCTC ATTCTTGCTC GGTGGTGTGC TTCCCTTTGG CTCGGTCTGC ATTGAACTGT TCTTTATCAT GAGTGCTCTC TGGTTACATC AGATTTATTA CGTTATGGGA TTCTTGCTCG CCGTCCTGAT TATCTTGGCC GCGACTTGTG CTCAAGTCAG TATCGTCATG GATTATTTGC AGCTATGCAG CGAAGATCAC CGTTGGTGGT GGAAATCATT CGGTAACTGT GCTTCCGGCG GCGTGTATCT GTTCGGGTAT TCACTTTGGT TTTTGGCCTC GCGATTGGAC CTGGTCGGGG TCTTGCCCGT GGTGGTGTAT CTGACCTATA TGAGTATGAT CAGTCTCTTG TTCGGAGTCT TCTGTGGCAG CGTCGGCTTT CTCTGCTCTT TCTGGTTCAA CCAAAAAATT TACGCTGCTC TCAAGGTAGA TTAA
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Protein sequence | PGVAPELYEG AETVFMFTDL VQSKKTHVPF EFYDLPSCDA PVMNNFRRKH KTQRKNLGAR LQGVELKPAP YVLKILQNIN CMTLCERNLG FREVKSLRKL VERQYRVHFT FDQLPVLMRS SELNYAVRGY PVGFKAPPSY TGLDHDEFYL YNHLKFTITY QPGQGDESSG VYITGFDVHP VSIRHGPDTC SNDEEDGGPI NDPSSYLPLT MTTSGQKNTV AYSYSVEWIE SALPWADRWD VYLIGSPDDD IHFFAIVNSL MIVLFLTGAI ATIMIRTLKK DISSYNEMSM LEDGGAEETG WKLVHGDVFR PPSTSPMALS VLVGTGAQIG TAFFISMLSA VFKLLNPMRK GQTLTAILIL YVLCGSVGGY VSARIYKFCD AKAWKMNAIL TATALPGTLV SIFTVLNIFL SIAGAATAVS FWVLLALFLL WTCVSAPLVF VGSFFGLKQG KIEIPSRVNQ IARVVPPLPW YSSPPISFLL GGVLPFGSVC IELFFIMSAL WLHQIYYVMG FLLAVLIILA ATCAQVSIVM DYLQLCSEDH RWWWKSFGNC ASGGVYLFGY SLWFLASRLD LVGVLPVVVY LTYMSMISLL FGVFCGSVGF LCSFWFNQKI YAALKVD
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