Gene PHATRDRAFT_12420 details

Gene Information

• Locus tag: PHATRDRAFT_12420
• ID: 7201128
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: -
• Start bp: 630722
• End bp: 632891
• Gene Length: 2170 bp
• Protein Length: 633 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002180281
• Protein GI: 219119029

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.388143
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTTATTGGAA AACTCCATAC AATGCGTGAT ACCCTACGAA ATTGTCCCCA GCTCTGGACC 
GAACTCTCCC GGAATTGTGG CGACAAACGA GCTCTCCTCG ATGAACACAT GTGTGACGAC 
AAGGTTGATG TTACGTTTGC GGAAATGAAT ACTATCGTAC GGAAAAGTGC GGCCGTCTTT 
CAGTCACTTG GTGTAAAACC AGGCGTCAAC GTTGCCATTT TGGGCGAAAA TTCGGCTCGT 
TGGCTCATGG TCGACCACGG CATCCAAATG GCCGGGGGCG CGTCGGCTGT CCGCGGAGCC 
GACGCACCGC TGGACGAATT ACGGTATATT TACGAGCAAT CCGACTCAGC AGGGATTGTG 
GTAGTACAGG GACCCAAACT GTTGGAAAAA TTGGCCAGCG ATGCAAGCGC GAAAGGAATG 
CACCGGTTGG GGTTGTCGAA CGAAGCCTAC GGCAAGGTGC ACACAGTGAT CTTGATGCAC 
CGCGAGAAAA AGACCAGTGA GGAGCTTACA AAGATGGTAG ACAAGTATGG TCTCACCGTT 
CGGGTCTTTG CCGACTTGCT GGAGGAAGTG CAGCCGGTGA CAGACGAACA AATCCCAGTT 
TTGGGACGCG ATGATTTGGC GACAATAGTC TATACCAGGT ATGTTGCATG AGTTGAGGGG 
ACATTGACGA AACAAATGAC ACTACAGCCA AGCTGATGTA GAGTCTGACC ATTTCTCTCT 
CATGTGATCT AGTGGGACGA CTGGGCGACC CAAAGGTGTT ATGCTCACAC ACGGCAACTT 
GATCCATCAA ATTGGACACC GAGTTGGCAC CGAAACGAGA TACGATGAAT CGGAGCCCTT 
GCCGGACGAA ACCATGCTTT CGCTTCTTCC AGTCTGGCAT ATCACGGAGC GATCGTTCGA 
ATTGTGGATG CTGGCACGAG GATGCAACGT GGTATATTCC TCTATTCGGA CCTTCAAAAA 
TGATTTGGCC AAGCATCGGC CAGAGTGGGC CGTGTTGGTA CCGCGAGTTC TAGAAAAGAT 
TGCGACCGGA GTACAAGACA AGTTTTCTTC GGGAAGCTTG CCCGTAAAGC TTCTCTCCAA 
ACTGTTCACC AGCACAAGCA AAGCAGCTGC CAAGCATCGA AAAATCACTC AGGGGTATGT 
GGTTGGTGAA CAACCCCCGG GAGCGATGGA AAAGTTGGCT TCAAAAGCAC TACTTGTGGC 
CTTGTCTCCT TTGAATGCTG TCGGCAACAA AATTGTTTGG AGCAAAGTAC AGAATGGCTT 
CGGCGGACGT ATGAGGACAA TCATGTCTGG TGGTAGTGCA CTGTCGGGAT CTTTGGAAGA 
ATTTTACGAA GCCGCTGGCC TAACTATTAT TGTGGCTTAT GGACTGACGG AATGTGCACC 
ATTGATTTCG CATCGACGGA GGGACGCCAA CCTTGTCACG GGCGGATGTG TCGGAACGGC 
TTGCATCGAT ACGGAACTCC GAGTGGTGAG CCCGGAAAGT AAGGCATCAA CTACTCCACG 
ACCCGCCTTG CCGGCTGGCG AAGTGGGTGT GGTTATTGCC CGGGGTCCGC AAATAATGAA 
AGGCTACTAC AAAGATGTGG CCGAAACCAA AAAAGCAATC GATCAATTTG GATTTTTCGA 
TACGGGTGAT CTTGGGCGAG TGAACCCAGC AACAGGTGAC CTGATTCTGA CTGGTCGAGC 
CAAAGACACT ATTGTGCTTT CCAATGGTGA GAACGTTGAA CCCGGTCCGC TTGAAGACGC 
CATTCTGGGT GAATTGTCGC TGATAGAGCA AGTGATGTTG ACGGGTCAAG ACGGAAGAAA 
ACTAACCGCG ATTGTCGTAC TGAGCCCCTC AGAACTCGCG AACGAAGGAT TCTTGTCCAA 
GGATGAAGGC GCCTTGATGC AAAAACGGAA CGAACAAGTG AACGACCCGA AATGTAGCGC 
AAAAGACTGC CAAGACAACG TAGCAGCACT GAATCAAGGA TCGAAGATAT TGCGTACGAA 
TAAGGACCTA ATTGCACGGC TGGTTGGCGA CTGCAAAAAA GCAACGAAAC GGTTTCAAAA 
ATGGGAACAA GTAAAAGACG TGTATGTTAC GTTAGAACCG TTTGCCATGG CGAACGGTCA 
ACTTACACAA TCCTACAAGG TAAAGCGGCC TTTTGTGTTG GAGCGATATG AGGACGAGTT 
GTCGAAGTAA 

 

Protein sequence

LIGKLHTMRD TLRNCPQLWT ELSRNCGDKR ALLDEHMCDD KVDVTFAEMN TIVRKSAAVF 
QSLGVKPGVN VAILGENSAR WLMVDHGIQM AGGASAVRGA DAPLDELRYI YEQSDSAGIV 
VVQGPKLLEK LASDASAKGM HRLGEELTKM VDKYGLTVRV FADLLEEVQP VTDEQIPVLG 
RDDLATIVYT SGTTGRPKGV MLTHGNLIHQ IGHRVGTETR YDESEPLPDE TMLSLLPVWH 
ITERSFELWM LARGCNVVYS SIRTFKNDLA KHRPEWAVLV PRVLEKIATG VQDKFSSGSL 
PVKLLSKLFT STSKAAAKHR KITQGYVVGE QPPGAMEKLA SKALLVALSP LNAVGNKIVW 
SKVQNGFGGR MRTIMSGGSA LSGSLEEFYE AAGLTIIVAY GLTECAPLIS HRRRDANLVT 
GGCVGTACID TELRVVSPES KASTTPRPAL PAGEVGVVIA RGPQIMKGYY KDVAETKKAI 
DQFGFFDTGD LGRVNPATGD LILTGRAKDT IVLSNGENVE PGPLEDAILG ELSLIEQVML 
TGQDGRKLTA IVVLSPSELA NEGFLSKDEG ALMQKRNEQV NDPKSTKRFQ KWEQVKDVYV 
TLEPFAMANG QLTQSYKVKR PFVLERYEDE LSK