Gene PHATRDRAFT_12172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12172 
Symbol 
ID7200542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp128880 
End bp129338 
Gene Length459 bp 
Protein Length153 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179799 
Protein GI219118032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTAAGACTTC GTGGAAAAGT TGACAGTGGG TATGGTAGAG GTGGCAAGAA ACTTGGTTTT 
CCCACAGCAA ATTTGCCTTC TCGGCTTTTT CAGAACGCGC TTCAAGACGT CCCTGCTGGT
GTTTACTTTG GCTGGGCGCT GTTGGAAAGT GATGAACTGG CGGCTCCAGG GCGAAATATT
GCGCATAAGG CAGTGGTCAA TGTTGGCTTC TCACCAACTT TTGAAGGACA AGAAAATGCT
GAAAAAATTG TGGAAGCACA TTTGATGGCA GAAGAACCTC TAACAGACTT CTACAACGAA
ACAATGCGTC TGCAACTTCA TGGCTTTCTA CGGCCCGAAA TAAAGTTTTC ATCGTTTCCG
GACTTGATTA AGCAAATAAA TGCCGACGTA GTCGATGCCA AGGAGGCATT GGATGTGTCA
CCATTTGTTG GCTTCAAGTC GGATTTATTT TTCTCCCAG
 
Protein sequence
LRLRGKVDSG YGRGGKKLGF PTANLPSRLF QNALQDVPAG VYFGWALLES DELAAPGRNI 
AHKAVVNVGF SPTFEGQENA EKIVEAHLMA EEPLTDFYNE TMRLQLHGFL RPEIKFSSFP
DLIKQINADV VDAKEALDVS PFVGFKSDLF FSQ