Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12043 |
Symbol | |
ID | 7200423 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | + |
Start bp | 900798 |
End bp | 901671 |
Gene Length | 874 bp |
Protein Length | 260 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179742 |
Protein GI | 219117913 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCGTCG TCACTGGTGC CTCGCGGGGA ATTGGGCTTC AGTTTGTGAA GACTTTGATC CTTCGTGCTA GGGTGCGACA TCTCTTGTAT TTGTGGAATG GACTCGATCT TGCCTTTTTT CCCTGTTTAG CTCACAATCT GTCTCTCGTG ATGCTTCGGC CAGGGAAGCA TTGTGGCGTG TTGCCGATCT CCGGAAAAAG CTGAGCTGCT ACAAGAATTT ATTGCTACCT TAGAAGATCC CCGTCGCATT CGCATTGTCT CTCTCGATTT GGAAGATCAA ACGTCCATTG AACGCGCTGG AGCCGAAATA AAAGAAATGT TTGGCCGAGT CGACATGCTA CTCAATGTAG CGGGGCTTCT GGGTGACGCC AAAACAACGC CTGGACCGGA ACGTTCGCTG GCGAAAGTTG AACGAGATTG GTTTGAAAAG ACGTTGGCTA TTAACACAAT TGGACCAGTT ATGTTGTCAA AAGAACTGTC GCCGTTGATG ATGCAGCGGC GCAAGCGAAA AAGTAGTGAC AACGATACTG AGACGCGAGC TGTAGCCGTC ATTGCAAGCC TAAGTGCACG GGTGGGTTCT ATATCGGACA ACGGTTTGGG AGGGTGGTAT AGTTACCGGA TGAGTAAATC GGCATTAAAT CAAGCGACAC GAACAATGGC GTTGGAAATG AAGCGATGTT CAACCTGGTG TATTGCACTG CATCCCGGTA CGACGGATAC GGACCTGAGT AAACCATTCC AGTCTAATGT CAAGGATGGA AGTCTATTCC CCGTTGACTT TACAACGGAA AAGTTGATGA ATGTCATTGA CTCCATGACC GAAAACAATT CAGGCGGTCT TTATGATTGG GCCGGCCAAG CCATTTCTTT TTGA
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Protein sequence | VFVVTGASRG IGLQFVKTLI LRARGSIVAC CRSPEKAELL QEFIATLEDP RRIRIVSLDL EDQTSIERAG AEIKEMFGRV DMLLNVAGLL GDAKTTPGPE RSLAKVERDW FEKTLAINTI GPVMLSKELS PLMMQRRKRK SSDNDTETRA VAVIASLSAR VGSISDNGLG GWYSYRMSKS ALNQATRTMA LEMKRCSTWC IALHPGTTDT DLSKPFQSNV KDGSLFPVDF TTEKLMNVID SMTENNSGGL YDWAGQAISF
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