Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12028 |
Symbol | |
ID | 7200608 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | + |
Start bp | 472776 |
End bp | 474956 |
Gene Length | 2181 bp |
Protein Length | 618 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179653 |
Protein GI | 219117726 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.400153 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATCAACCTGC CTTTCCTCTT GAACAGATAC TTGCAGGAGT CAGGCTTTGT ACATTCAGCC TTCTCTTTTG CTCACGAAAG TATGTTAGGA AGGACTGGTT TACGCTCGGC GGATAAAGCT TTACCTCCGG GGGCACTGAT ATCTTTTTTG CAAAAGGGTC TACAATACGT TGGAATCGAG GAACGCCTTC GACATGACAG CACAGGAGGG AGAAAGGCTG CAACTGAGAC GGAAGGAGAC TTTTCTCTCC TTTCCCCTCT CACAGTGGCG ACATTGGCAA GGAAAAACCC TCCGATTCAG TTGAATGTGC CACCAGCGGC AGCAGCAGCT GCTATGAAGG CAAAGCTGGA AGTTGAATCA AAATTGCACG CTGAACGTAT GTCAAATGTG ATGGCTAGTC AGATTGCTAC GAGCGGACCG TTGGCTCCAA TCGGTCTACC ACCGGTAATG GATATTCAAA ATGCGCATTT CGCCAGGCAG GCATTGGCTG CGCAGGCAGC AGCAGCCCAC GCGGCTGCGG CTCTCAGCCA ACTGCAACAA TTAGGGCACC AACCTACAGC AGTATCCGAT TTGTTCTCCC AGCAAAAGCT GGCACAACCG CATGTCAATA CTGCCGCAGA GCTTATGGGT CTGCAAAAAA ATAACCTAGT CCAACAGGAA AGTACTGCTT CTTCTGGTGG AATAGATACA CTAGCCGTCA CTGCTCAAGG GGGGAAACGA GTCGCATCTG GGTCGAAACG AAGCATTAAG AAGCAAAAGA AGGATAAACC TGACCCAAGA AAAGGAAAAC TCATTGACGA TGCAAAGAAA AGTTTAGAAG GCAAAGAGTT GCATCCAATG GACGTTGAGG AAAACGACAA CCAGGCGGAC TCGGCTTCCT TTCCTGCTCA CAAAGGAAAC TCACCGCAGC CGCTACCAGC GCAGGAACCT TTGAATGGCC AGGCTGTGGA AATCAATGGA TCAACGGGGC AAACGACTAC TTCCGGGGTA AACGGTGGAC AGCATGAATT CACAAGGAAG AACGTTGACC AGCAGCAACA TTCCACTATC GATGTTGATA AAGAAGACGC CGCAACAGAC GTTTCTCCGA AAGAAATATT GAAATTGGAA ATGCATCAAT CTGAAGTCTT TATGTGTGCT TGGAATCCTG TATTTTCGGA TCTCATTGCC ACGGGTAGTG GTGACGCATC GGCGAGAATA TGGCAAATGC GTGGACTGTA TGCTGCTGCT GGATTGACTA CTGTGAAGTT GTTGCCGCAC GGCACCGACC CAAGAGATAA GAAGAATAAG GATGTTACAA CGCTTGAATG GTCGTCTGAT GGGTTGTTAT TGGCTACTGG AAGCTACGAT GGAGTTGCTC GTGTCTGGGC GCGCAATGGA GCCCTCATGC ATACGTTAAA GGGGCACAAC GGTCCTATTT TTTCGTTGAA ATGGAATAAG AGAGGGAATT TTCTGCTGTC CGGGAGTTAC GACAAAACAA CGATCGTTTG GGACGTTTCA GGACCAGCTG GGTTTGTGGA GCAACAATTT ACTGACCATC AAGCACCCGC TCTCGACGTC GACTGGAAGG ACGATGTGAC ATTCGCATCC TGCTCTACGG ACAAAACGGT CCACATATGC CGAGTAGGTG TACCCAAGCC CTTAAAAGTT TATTCAGGAC ATACAGACGA AGTAAATGCC GTGAAATGGG ATCCCTCAGG TCAGCTGCTA GCAAGTTGCT CGGACGATTG TACGGCCAAA GTTTGGGACG TGGAGTCTGA TCGCACAGAC CCGCTTCATG ACCTTACGAG CCACCAGCAG GAAATATACA CTGTAAAATG GAGCCCAACT GGTTCGGGTT CGAAAAATCC TTCGAAAAAA GCCGTTTTAG CGACGGCATC GTTCGATGGT TCAGTACGAC TTTGGGACGT AAAAGACGGT TCCTGCTACC GAGTTTTCAA TCGTCATCGA GACTCGGTGT ACTCGGTTGC CTTTTCACCG TCGGGGGACT ATCTTGCTAG CGGGTCTCTT GCTGGGCAAA TGTATATCTG GAATATTGAG GAAGGGCGTC ATATAAAGAG CTACAAGGGA AAGGGCGACA TTTTTGAAGT GGCATGGAAC AAAGAAGAGA CTCGAGTAGC TGCTTGCTTC TCATCGAATG TCGTTGCGGT GATCGACTTT GACAAAAGCA CAATCATATG A
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Protein sequence | INLPFLLNRY LQESGFVHSA FSFAHESMLG RTGLRSADKA LPPGALISFL QKGLQYVGIE ERLRHDSTGG RKAATETEGD FSLLSPLTLA QPHVNTAAEL MGLQKNNLVQ QESTASSGGI DTLAVTAQGG KRVASGSKRS IKKQKKDKPD PRKGKLIDDA KKSLEGKELH PMDVEENDNQ ADSASFPAHK GNSPQPLPAQ EPLNGQAVEI NGSTGQTTTS GVNGGQHEFT RKNVDQQQHS TIDVDKEDAA TDVSPKEILK LEMHQSEVFM CAWNPVFSDL IATGSGDASA RIWQMRGLYA AAGLTTVKLL PHGTDPRDKK NKDVTTLEWS SDGLLLATGS YDGVARVWAR NGALMHTLKG HNGPIFSLKW NKRGNFLLSG SYDKTTIVWD VSGPAGFVEQ QFTDHQAPAL DVDWKDDVTF ASCSTDKTVH ICRVGVPKPL KVYSGHTDEV NAVKWDPSGQ LLASCSDDCT AKVWDVESDR TDPLHDLTSH QQEIYTVKWS PTGSGSKNPS KKAVLATASF DGSVRLWDVK DGSCYRVFNR HRDSVYSVAF SPSGDYLASG SLAGQMYIWN IEEGRHIKSY KGKGDIFEVA WNKEETRVAA CFSSNVVAVI DFDKSTII
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