Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11883 |
Symbol | |
ID | 7200115 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | + |
Start bp | 593414 |
End bp | 594756 |
Gene Length | 1343 bp |
Protein Length | 357 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179246 |
Protein GI | 219116903 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.615976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTTCGT ACGAGGATTT ACAGGAAAAG CTTCCTTCGA AAGCGGTGAT TGACGTGGTG TCCATGAAGC CCGAGAAAGT CGTTGCTTCG GACGTGGCTA CGGCAGCGGG GATCTCGCTC TCCCAGGCGC GCAAGGATTT GACCGCCTTG GCGTCCATCT CGCGTGGCGA CATTTCAGTG GACAAGGACG GAGAACTCAT CTATTCCTTT CCGCGTGATT TGAATTCCGT ACTGGCCAGC AATTCCGTCA AGTACCAAAC TTTGCAGCTG GCGCGGAAAG TGTGGCCGGC TGTCTTTTGG GGCGTGCGCG TTTCCTTTGG TGTCACGTTG TTGGTGTCGC TGGTGGCCGT CTTTACTACC ATCTTTTTCA TCACTTCCAG TAGTTCCAAT AACGATGATC GACGAAGAGA TGACCGTGGC GGTGGTATGT CCTTTGGCAT GGGAGGCATG TGGGGACCAT CGCCATTGGA TTTCTTCTTC TACCGTCCTT ACGGGTCGTA CGGATACTAT GGTCAGCCGG AGCGTGATCC GGAAGAGATG GGCTTTTTCG AGTCGGTCTT TAGTTACATA TTTGGTGATG GCGATCCCAA CGCTGGTCTG GAAGAGAAGC GACTGGGTTT AGTGGCCAGC ATGATTCGGG AAAACAAAGG AGCTGTGACC GCCGAGCAGT TGGCACCGTA CTGTGACGGC GCGCCGAACC CACAAGAACT CGCATCCAAG ACGTACGTTG ATGAAGTAAG TATAGCGATG TATGCGCAAG AGAGATATGC AGTCGTTTAC CTATCGTCGC CTCTGTTCGA GTTTGGCTCA TCCTATTGGC ACCTGTCCAA CAGAGCTTCG TGCTACCGAT TGTTACCGCA TTGAATGGTG AACCCCGCGT GACTGAAGAT GGTTCGATTG TCTACACGTT CCCGGAGCTG CAAATGTCGG CGGCGACCGT CAAAGTGATA CCCGCAGCAT CCAAAGAAGG TATGATTCTA CGTCGTGCCG GACTCCGTCC CGAAGCATCC ACGGCAGATA TCAAGCAGCT GTTAAATTAC AACGGAATCG GAACTCGCGG TGCCCGGGAT CGCCGAGACT TGGTGAAGCT TGTCGAAGAA GTCATGCCTC CCATGACGGA GGAGGAAGAG ATGGAAATGA TGGGACAGAA TCCGGCGTTG TTGCAAGAAC GGGAATGGAA GTTTAGTTTG GCACCCGAGA TCAATCGATT CCTAGCCGGG GGGTTGGGGG TGGTGAATTT GGGAGGTGCG CTGTATCTGG GCAACTTGTT GGGACAATAC GCGATGTACG GCGTCAGACT ACCTTCCTAC TTTGGCATTG TGCAGGGCGC CTACCCTTTC CTG
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Protein sequence | MVSYEDLQEK LPSKAVIDVV SMKPEKVVAS DVATAAGISL SQARKDLTAL ASISRGDISV DKDGELIYSF PRDLNSVLAS NSVKYQTLQL ARKVWPAVFW GVRVSFGVTL LVSLVAVFTT IFFITSSSSN NDDRRRDDRG GGMSFGMGGM WGPSPLDFFF YRPYGSYGYY GQPERDPEEM GFFESVFSYI FGDGDPNAGL EEKRLGLVAS MIRENKGAVT AEQLAPYCDG APNPQELASK TFVLPIVTAL NGEPRVTEDG SIVYTFPELQ MSAATVKVIP AASKEEMEMM GQNPALLQER EWKFSLAPEI NRFLAGGLGV VNLGGALYLG NLLGQYAMYG VRLPSYFGIV QGAYPFL
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