Gene PHATRDRAFT_11866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11866 
Symbol 
ID7200213 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp393639 
End bp394599 
Gene Length961 bp 
Protein Length286 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179198 
Protein GI219116807 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.163487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTGG GTGTTGCAAC TTATCTACGA TTTGTCGCAT CCGGGGCCGT ATGCTGCTCC 
GGAGTGCATC TAGCCTTGAC ACCCATTGAT GGTAAGTCCG GTTTTATGGA TCATTGCTAC
ATCATTGAAA GCTCTTTACG AACTCGGCTA TGAATAGACG CTCTCTTACC AATTACCATT
CTGTTCTATC ACAGTTGTCA AAACAAAGGT ACAAACAGAT CCCGACAACT ATCCCGGTAT
TGTTCGGGGC TTTAAAAAGC AGCTCGAAAT TGGTGGAGTC TCCGGTTTCT TTACAGGATG
GGCACCTACC TTTCTAGGAT TCTTTGTTTG GGGAGGTCTT TCGTATGCAT TGACCGAATT
CCTTCGACGA TACTTTACCA CTCTTCTGGG GAATAGCGCT GCTGGATTGG AAATACCAAT
CATTCTTTCG GCGTCCGCGT TTGCGGCCTT TGTTGGGTCT TTCGTTCTTT GTCCATTCGA
GTCGGTGCGT ATTCGTACAG TCGCACAGCC CGATTACGGC TCGAATGTTG TGGATGTTGT
CAAACGGATT GTACGAGAAG AAGGACTGTT TTCCCTTTTC AAGGCCGTGC CTCTCTTTTG
CGCCAAAGAG ATTCCCTTTG CTATGGGGAA GTTTACTGTC TTCGATCTGT CGACAAAGTA
CCTTTACGAG CAGTTTCCTA CCGCCCGAGA AGATATTCAG TTGTCGCTGT TGATCAGTTT
GGCCGGTGGG ACAATTGGTG GACTTGTCGC CGCCGTTGTC AGCAATCCTG GTGACGCCAC
CATTAGTGAA TTGAAAAAGG CCAAATCGGA CATGGGTCCG TTGGAGGCTG GCCAATTGTT
GGTAGAACGG GGTGGCCCCG CCGCTCTCTT TACCGGCTTG CCACTTCGCA TGGTTTTTTA
TCCTCTTGTC GTCAGTTTAC AATTTTTGAT TTACGACAGC GTTCGGCTGG CCCTTGGGGT
T
 
Protein sequence
MELGVATYLR FVASGAVCCS GVHLALTPID VVKTKVQTDP DNYPGIVRGF KKQLEIGGVS 
GFFTGWAPTF LGFFVWGGLS YALTEFLRRY FTTLLGNSAA GLEIPIILSA SAFAAFVGSF
VLCPFESVRI RTVAQPDYGS NVVDVVKRIV REEGLFSLFK AVPLFCAKEI PFAMGKFTVF
DLSTKYLYEQ FPTAREDIQL SLLISLAGGT IGGLVAAVVS NPGDATISEL KKAKSDMGPL
EAGQLLVERG GPAALFTGLP LRMVFYPLVV SLQFLIYDSV RLALGV