Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11866 |
Symbol | |
ID | 7200213 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | + |
Start bp | 393639 |
End bp | 394599 |
Gene Length | 961 bp |
Protein Length | 286 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179198 |
Protein GI | 219116807 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.163487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACTGG GTGTTGCAAC TTATCTACGA TTTGTCGCAT CCGGGGCCGT ATGCTGCTCC GGAGTGCATC TAGCCTTGAC ACCCATTGAT GGTAAGTCCG GTTTTATGGA TCATTGCTAC ATCATTGAAA GCTCTTTACG AACTCGGCTA TGAATAGACG CTCTCTTACC AATTACCATT CTGTTCTATC ACAGTTGTCA AAACAAAGGT ACAAACAGAT CCCGACAACT ATCCCGGTAT TGTTCGGGGC TTTAAAAAGC AGCTCGAAAT TGGTGGAGTC TCCGGTTTCT TTACAGGATG GGCACCTACC TTTCTAGGAT TCTTTGTTTG GGGAGGTCTT TCGTATGCAT TGACCGAATT CCTTCGACGA TACTTTACCA CTCTTCTGGG GAATAGCGCT GCTGGATTGG AAATACCAAT CATTCTTTCG GCGTCCGCGT TTGCGGCCTT TGTTGGGTCT TTCGTTCTTT GTCCATTCGA GTCGGTGCGT ATTCGTACAG TCGCACAGCC CGATTACGGC TCGAATGTTG TGGATGTTGT CAAACGGATT GTACGAGAAG AAGGACTGTT TTCCCTTTTC AAGGCCGTGC CTCTCTTTTG CGCCAAAGAG ATTCCCTTTG CTATGGGGAA GTTTACTGTC TTCGATCTGT CGACAAAGTA CCTTTACGAG CAGTTTCCTA CCGCCCGAGA AGATATTCAG TTGTCGCTGT TGATCAGTTT GGCCGGTGGG ACAATTGGTG GACTTGTCGC CGCCGTTGTC AGCAATCCTG GTGACGCCAC CATTAGTGAA TTGAAAAAGG CCAAATCGGA CATGGGTCCG TTGGAGGCTG GCCAATTGTT GGTAGAACGG GGTGGCCCCG CCGCTCTCTT TACCGGCTTG CCACTTCGCA TGGTTTTTTA TCCTCTTGTC GTCAGTTTAC AATTTTTGAT TTACGACAGC GTTCGGCTGG CCCTTGGGGT T
|
Protein sequence | MELGVATYLR FVASGAVCCS GVHLALTPID VVKTKVQTDP DNYPGIVRGF KKQLEIGGVS GFFTGWAPTF LGFFVWGGLS YALTEFLRRY FTTLLGNSAA GLEIPIILSA SAFAAFVGSF VLCPFESVRI RTVAQPDYGS NVVDVVKRIV REEGLFSLFK AVPLFCAKEI PFAMGKFTVF DLSTKYLYEQ FPTAREDIQL SLLISLAGGT IGGLVAAVVS NPGDATISEL KKAKSDMGPL EAGQLLVERG GPAALFTGLP LRMVFYPLVV SLQFLIYDSV RLALGV
|
| |