Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11390 |
Symbol | |
ID | 7199896 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | - |
Start bp | 242956 |
End bp | 244392 |
Gene Length | 1437 bp |
Protein Length | 400 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178958 |
Protein GI | 219116326 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCTGACAAAT CTAAGCGCAT TGAAATCGTA ACAACTGCTT CCATGCCGTG GCGGACCGGG ACAGCTGTCA ACCCACTACT GCGAGCGGCG TACTTGACAC GGGGACGAAA GGCTGCCGGG GGTAGCGTTA CTCTCATGTT ACCCTGGCTA GAACGCAAAT TAGATCAGGA AAACGTATAT GGAAAAGAAA ATACTTTTGA ATCTCCTGTG GAGCAGGAAG TATATATTCG AGCATGGCTC CGTGAATCGG CCAACATGCC TGAAGCCAGC GAAGAGCTAA ACATAAGATG GTACACTGCC TGGCAGAATT CGGTTGAGAA TTCGATTTAT AGTATGGGCG ATATCACGGC ATTAATCCCG GCAGACGAAG TGGATATTTG TATATTAGAA GAACCAGAGC ATCTGAACTG GTATGGTTTG CTGTAGATTT CTCTCTCGTC GATTGCTATG CCGACCTCAC CATGCATTGA TTGGCTTTTG ATAGGTATCG TGCACCAGGT GAAAGTTGGA CTAAAAAATT CAAGCACGTC GTTGGAATCC TACATACAAA CTACTTCCAA TACGCTCTTG ATCAGCCAGC TGCATTCATC AGGGTGCGTT GTGGTCACGC CCTTTGCCCA GTCCGTAGTC ATATTTGCGC ATTCTCATTT ATTTTTCTGC ATCTCGAAAA CAATAGGCAC CCGCCATGCG ACTTTTGTGC TCGTGGATGT GTCGTGCACA CTGTCATCGC GTCATTAAAC TTTCAGGAAC ACTGGACGTA GTTGCGCCCG AAAAGGAATT GGTCGAGAAT GTGCATGGAG TGCGAGAAGA TTTTCTCGAA GTCGCCGCAA AGCTGCGTGA TAAAGTATTA GCAGCTGATC ATGTTAAAGA TCCCATTTTT GCATCGGACT CGCCTCCAAC TGTTTATTTC ATTGGAAAGA TGCTCTGGTC AAAAGGATTA GGGTCGCTAA TGGAGCTTTT GAAGTATGCA GAAGAGAGTG CCGACCTGAA TGTTAAGGTT GATATGTACG GGTCCGGGCC GGACCAAGGC GCAGCTACAG CAAAGGCAAA ATCACTCGAG CTCGACATGC CCTTTCATGG CCCCGTTGAC CATGTTGAGC TTGGAAGCAC TCATAAGGTG AGTGCAAGCT TCGTTGCTGC CAGATTTCTT GTTTGGCTTC ACCTAACTTA AGCGCGACTT TTCAACAGAT ATTCGTCAAC CCATCTACGT CAGAAGTTCT TTGTACCACA TCGGCTGAGG CTTTGGCTAT GGGCAAGTTC GTAATTTTGC CTTCGCATCC GTCAAATGAC TTTTTTGCCC AGTTCCCGAA CTGTTTAGCA TATAGTTCCA AAGAGGAGTT CGTCGGTAAT CTATACTATG CCATAACGCA TTCACCTGAA CCTCTAGCGG ACGAGTATTC ACATGCTTTA AGCTGGGAAG CAGCAACGCA ACGACTC
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Protein sequence | SDKSKRIEIV TTASMPWRTG TAVNPLLRAA YLTRGRKAAG GSVTLMLPWL ERKLDQENVY GKENTFESPV EQEVYIRAWL RESANMPEAS EELNIRWYTA WQNSVENSIY SMGDITALIP ADEVDICILE EPEHLNWYGL LWTKKFKHVV GILHTNYFQY ALDQPAAFIR APAMRLLCSW MCRAHCHRVI KLSGTLDVVA PEKELVENVH GVREDFLEVA AKLRDKVLAA DHVKDPIFAS DSPPTVYFIG KMLWSKGLGS LMELLKYAEE SADLNVKVDM YGSGPDQGAA TAKAKSLELD MPFHGPVDHV ELGSTHKIFV NPSTSEVLCT TSAEALAMGK FVILPSHPSN DFFAQFPNCL AYSSKEEFVG NLYYAITHSP EPLADEYSHA LSWEAATQRL
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