Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11217 |
Symbol | |
ID | 7199548 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | - |
Start bp | 346269 |
End bp | 347588 |
Gene Length | 1320 bp |
Protein Length | 340 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178983 |
Protein GI | 219116376 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCACAC CGCGTGAAAT TATGAAAGGA CTCAACGAAT ACGTAATTGG ACAAAAGAAC GTGAAGGTAG CCTTGTCAGT TGGGGTCTAC AATCATTACA AGCGTATTTT TGTTGTCGAG GCACAGGCAG CGGCTGACTT GCGCAAGAGG GAAGCGGAAG AAGGATTTAT GACACCCGAC GGACCAACTC TGGCCGACAT GAATTTGGGG CAACTTGGCA ACATTAAGGA AGAAAGGCCA GCCACTGGTG CCTACGGCCA ACCATTTCGT GAAACTCCCG ATGTGAATAG CATCTCGGAC AATCTGTTTG GACGGGATGT GGAAGATTGC GAAATAGACA AAAGCAATAT TTTATTGTTG GGACCCTCCG GAAGCGGAAA GACCTTGCTC GTCAAGACAC TGGCGCGTTT GATTGACGTC CCTTTGGTCA TTGCCGATGC AACTTGTTTG ACACAAGCTG GCTACGTCGG TGAAGATGTG GAAAGTATCC TGTTCAAATT ATATCTTGAA AGCGGACAAG ATGTAGAACG ATGTCAGCGG GGTATTGTTT ACATCGACGA GGCGGACAAG ATTCGCAAGT CTGGGGGAAA TGTTAGCATC AGTCGGGACG TTTCGGGAGA AGGAGTTCAG CATGCGCTGT TGAAGATTGT AGAAGGCAAT GTTATCAACG TCCCAAAGGT TAGTGTAGCT GGAATGCCCG GGTCTTGTAA TGGGGCGATT GTCCCATGCT CACTTTGACC TTTTCACTTT CCACAGGAAC CCGGTCGCAA GAATCCCCGG GGCGACTTTT TGCAGATCGA TACGACCAAT ATTCTTTTTA TCTGCGGAGG AGCATTTTCA GGCCTCGAAC GCATTATCAA TCGTCGTATG GACGCAGCCT CTATTGGGTT CGGTGCACAA ATGAAGAAGG CAATTGACGA TCCCAAGGTT CAAGGACGCT ACTTTGACAG CGCCATCCCC AAAGATCTAG TAGAGTACGG GATGATTCCT GAATTTGTCG GTCGCTTTCC GGTGATTGTT GCAACCAAGG GACTCGACAA GAAAAATCTC ATCGACATTT TGACCGTCCC AAGGAATTCG ATTATGAAAC AGTACCGCCG TTTGTTTGCG ATGGATGATG TAAATTTCCA CGTCACCAAG GAAGGTCTCG ATGAAATCGC GGAAACTGCT CTTGGACGTG GTACGGGAGC CCGAGGATTG CGATCGATTA CTGATTCGGT CCTCATGGAA ACACAGTACG TTGTGCCTTC CATGCCTGAT GTGCACACCG TGTACGTGGA TGCATCAGCC GTACGAGGGG AACGCAAACC CATATTGTTA
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Protein sequence | MPTPREIMKG LNEYVIGQKN VKVALSVGVY NHYKHCEIDK SNILLLGPSG SGKTLLVKTL ARLIDVPLVI ADATCLTQAG YVGEDVESIL FKLYLESGQD VERCQRGIVY IDEADKIRKS GGNVSISRDV SGEGVQHALL KIVEGNVINV PKEPGRKNPR GDFLQIDTTN ILFICGGAFS GLERIINRRM DAASIGFGAQ MKKAIDDPKV QGRYFDSAIP KDLVEYGMIP EFVGRFPVIV ATKGLDKKNL IDILTVPRNS IMKQYRRLFA MDDVNFHVTK EGLDEIAETA LGRGTGARGL RSITDSVLME TQYVVPSMPD VHTVYVDASA VRGERKPILL
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