Gene PHATRDRAFT_11174 details

Gene Information

• Locus tag: PHATRDRAFT_11174
• ID: 7199867
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: -
• Start bp: 95344
• End bp: 97313
• Gene Length: 1970 bp
• Protein Length: 627 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002178928
• Protein GI: 219116266

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0482679
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGATT TGGACCTCGA TGTGTATCTG GTGCCTTCGG ACGATCCGCA TTTGTCAGGT 
AGGCTAAAGG CGTCGCGTTG TCGCGCTCAT TTTCTTTTGC TGCTTGCCGC TTCTTATACT 
GTTTTGATCG TTTCTTTTTC GTAGAATACG TCCCCACGGC CTACGAACGT CGTGCCTTTT 
TGACAGGCTT CAAGGGTAGT GCTGGAACGG CCGTGATTAC ACAGGATGCT GCCTGTCTCT 
GGACCGATTC TCGCTACTGG AACGAAGCGG GTCTGCAATT GGACCCTGAT TGCTGGACTT 
TGCAAAAGGC CGGACTTGCC GATACCCTCA CCATTCCCAA ATGGCTAGCC GCGGCAGCGG 
TGAAAAAGTA CGGCCAGAGT GATCCTCAAA CACCGCTCAA AGTCGGTATG GATCCATTCG 
TGCACGCGGC CTCGTTTGCC AAGGAGCTCG AAACGGCCTT TGCGGAAGCC GCCGCCGACG 
AACTGAATAT TGCGGACGGG GAGGCAACGA AAATTGGAGT TCTGGATACT TCCAACGAAA 
ATTTGGTTGA TCCTATCTGG ACGGACCGAC CGGAAGTTCC AACTTCACCA TTCCGCGTCC 
ATCCGATGGA ATACGCTGGC GTGAGCTTAG AGGACAAGAT TACCGCAGTA CGCAAGGAAA 
TGAAGGAGAA AAAGGCTACC ATGACGGTGC TTTGCACCCT AGATGATGTG GCCTACTTTC 
TAAATATGCG TGCCATGGGA GACATCGACA CTTGTCCGGT TGGTATTGCC TATGTGACGG 
TGGAGGCTGA TCAAATTTCC TTATACTGTG ATCCCCGTAA AGTGGAATCC TCGGCCGTTC 
AATCTCATTT AAATGATGCT GGTGTCACAA TCAAGCCTTA CGATAGCGTT GTGGCAGAAG 
TGGATGCTCA CTGCCAGACA GCGGGTAACA AGGTTTGGAT TGATCTGTCT CGAGCCAACT 
ACGCTCTAAG CGCCGTCATT CCAGAAAAGA GTTTGATCAA TTCGCAAAAC GCGGTGACTC 
CCATGAAGGC TTGCAAAAAC GACGCCGAAC TGGAAGGGAT ACGCAAGGCC CATATTGTGG 
ACGGAGTAGC CATGGCCAAA TTTATGGCTT GGCTGACGGA AGAGATTGTC GGCAAAGGTA 
GATCCGTCTC CGAAGTGGAG ATCGACGAAG TGTTGACGTC CTGTCGCGCT GAACAGCCTG 
GGTTCAAAGA AGTTTCGTTC CCCACTATTG CCGGCGTTGG TCCTAACGGA GCGATTGTGC 
ACTACCGAGC CAGCACCGAC AGCGATCTGA TGCGTCATCT CGACACTGTG AACCCCATTT 
TGATTGATTC AGGCGGTCAG TACGAATATG GCACCACAGA TGTGACGCGT ACATGGCACT 
TTGGCAAGCC TACGGACGAG TTTGTCGATT ACTACACGCG CGTCCTGAAG GGAAATATTG 
GCGTTGACGT GATGCAGTTT CCAGAAAACA CTCCTGGATT CGTTTTGGAC GTGCTTGCGC 
GGCAGAATCT TTGGGCGATT GGAAAAGATT ACGGCCACGG AACCGGCCAT GGAGTCGGCG 
CTGCTTTGAA CGTGCACGAA GGACCCATGG GAATTAGCCC TCGTTGGACC AACAAGGAAG 
TTTTGAAGAA TGGCATGGTG CTTTCGAATG AACCAGGCTA CTATGAGGAC GGCAAGTTCG 
GGATTCGTAT TGAAAACTTG ATGGAGATTC AATACGTAAA CCCGGGACAC AACAATGCGG 
AGGAAGAAAG CAGTAGCGAG AAGAAGTTCT TTAAGTTTTC AAAACTTACC ATGATTCCAA 
TTCAGACGAA TCTGATCAAT GTGGACCTAC TGTCAGCCGA CGAAATGAAT TGGCTGGATT 
CTTATCATGA AGAGGTGCTC GAAAAAGTTA GCCCACATTT GGACGAAGGC AGTCCGGCAC 
TGCAGTGGCT CCAGCAGTCA TGCAAGCCTA TTGACCGTAA AGGCCGCTGA 

 

Protein sequence

MKDLDLDVYL VPSDDPHLSE YVPTAYERRA FLTGFKGSAG TAVITQDAAC LWTDSRYWNE 
AGLQLDPDCW TLQKAGLADT LTIPKWLAAA AVKKYGQSDP QTPLKVGMDP FVHAASFAKE 
LETAFAEAAA DELNIADGEA TKIGVLDTSN ENLVDPIWTD RPEVPTSPFR VHPMEYAGVS 
LEDKITAVRK EMKEKKATMT VLCTLDDVAY FLNMRAMGDI DTCPVGIAYV TVEADQISLY 
CDPRKVESSA VQSHLNDAGV TIKPYDSVVA EVDAHCQTAG NKVWIDLSRA NYALSAVIPE 
KSLINSQNAV TPMKACKNDA ELEGIRKAHI VDGVAMAKFM AWLTEEIVGK GRSVSEVEID 
EVLTSCRAEQ PGFKEVSFPT IAGVGPNGAI VHYRASTDSD LMRHLDTVNP ILIDSGGQYE 
YGTTDVTRTW HFGKPTDEFV DYYTRVLKGN IGVDVMQFPE NTPGFVLDVL ARQNLWAIGK 
DYGHGTGHGV GAALNVHEGP MGISPRWTNK EVLKNGMVLS NEPGYYEDGK FGIRIENLME 
IQYVNPGHNN AEEESSSEKK FFKFSKLTMI PIQTNLINVD LLSADEMNWL DSYHEEVLEK 
VSPHLDEGSP ALQWLQQSCK PIDRKGR