Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_11022 |
Symbol | |
ID | 7197684 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 576024 |
End bp | 577215 |
Gene Length | 1192 bp |
Protein Length | 366 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178536 |
Protein GI | 219115481 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTCCG GAAGTGGTTC CCGCGTCAAC AAGGACCCCG AAAGTCTCCT GCGTCTCGGA TTGCCCATTA AGAACAAAGA GGTACGGAAC CATACGCGCT CTCTTATTCA TAGTGCACGA TCCGGCCTGT ACGTAGCTTT TCTAACTCTG TCCTCTCGTC ACTTTCGGAA AGGTGCGCAA GTTGCAGGCA AGTTTGGAAG GAATTAAATT GGACATTGGC TCCAAGCGCA AGCTGGCTGC CGCTGATGCC GTAAAAAAAT CCAAAGCCTT TCTCGTGGGT AAGGATGCGG ACAAGGTAAA GGCTGCCTGC CGGGACCCTT CTATTTGTGG TGCGATTATT AAGGACATGG TTGTGAAACT CGATCCCCTC GCTGACGCCC TCAAAGAAAG TCAAGAAGCC TTTCAAGGAT CTGAACAGGA GCGCACAGCC TTGGACAAGG CTTATGCTGC CCAACAGGTT GTTGTGGATC AGCTGACCGC CTTGGAAGAG CAGCTGATTC CGGCGGGATA CAAACGACCC GTTCCCGAAG AGTACTCCGA CTTGCCGCAA CTCCATGGTC GCGCGACGGT GGAAATGCTT ATCGACAAAG CTGATAAGTC GACCTTTGAC TACAACGGAA AAATCGTTCC TCAGGCAAAA CTCGTAATGG TGATTGATGG TTATACTGCT CCAGTCACTG GTGGAAACTT TATTGATTTG GTTCAGAAGG GCTTTTACAA CAAAATGGAA ATCCAACGAT CGGATGGCTT CGTTGTACAG ACTGGTGATC CAGCCGGTGA AGCCGATGGC TATGTTGCTA AAGGTAGCAA GACGGTAGGG AACGGAAAAC ACGGAGAGCG TCTCATTCCG CTTGAAATCC TGGTTCGCGG AGACAGCACT CCGGTATACG AATCCACCAT CGAAGACGAA GGCCGTGGTG GGGAGGCAAC GGTCCTGCCG TTTTCGGCCT ACGGAGCTAT GGGCTGGGCA CGAGAAGAGT ACGATCCCAA TTCAGGTAGC TCACAGTTCT TTTGGTTACT CTTTGATTCC GATCTGACTC CGGCAGGTAA AAACGTGTTG GATGGACGGT ATCCGTGCTT TGGGTACGTC ACCGAAGGCG CCGACTTTTT GAGCTCCATC TTGGAAGGGG ACGTGATTGT ATCGGCCAAA GTCGTCGATG GAGGAGAAAA TTTGGTGCAA CCGCAATCGT AA
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Protein sequence | MASGSGSRVN KDPESLLRLG LPIKNKEVRK LQASLEGIKL DIGSKRKLAA ADAVKKSKAF LVGKDADKVK AACRDPSICG AIIKDMVVKL DPLADALKES QEAFQGSEQE RTALDKAYAA QQVVVDQLTA LEEQLIPAGY KRPVPEEYSD LPQLHGRATV EMLIDKADKS TFDYNGKIVP QAKLVMVIDG YTAPVTGGNF IDLVQKGFYN KMEIQRSDGF VVQTGDPAGE ADGYVAKGSK TVGNGKHGER LIPLEILVRG DSTPVYESTI EDEGRGGEAT VLPFSAYGAM GWAREEYDPN SGSSQFFWLL FDSDLTPAGK NVLDGRYPCF GYVTEGADFL SSILEGDVIV SAKVVDGGEN LVQPQS
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