Gene PHATRDRAFT_11022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_11022 
Symbol 
ID7197684 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp576024 
End bp577215 
Gene Length1192 bp 
Protein Length366 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178536 
Protein GI219115481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTCCG GAAGTGGTTC CCGCGTCAAC AAGGACCCCG AAAGTCTCCT GCGTCTCGGA 
TTGCCCATTA AGAACAAAGA GGTACGGAAC CATACGCGCT CTCTTATTCA TAGTGCACGA
TCCGGCCTGT ACGTAGCTTT TCTAACTCTG TCCTCTCGTC ACTTTCGGAA AGGTGCGCAA
GTTGCAGGCA AGTTTGGAAG GAATTAAATT GGACATTGGC TCCAAGCGCA AGCTGGCTGC
CGCTGATGCC GTAAAAAAAT CCAAAGCCTT TCTCGTGGGT AAGGATGCGG ACAAGGTAAA
GGCTGCCTGC CGGGACCCTT CTATTTGTGG TGCGATTATT AAGGACATGG TTGTGAAACT
CGATCCCCTC GCTGACGCCC TCAAAGAAAG TCAAGAAGCC TTTCAAGGAT CTGAACAGGA
GCGCACAGCC TTGGACAAGG CTTATGCTGC CCAACAGGTT GTTGTGGATC AGCTGACCGC
CTTGGAAGAG CAGCTGATTC CGGCGGGATA CAAACGACCC GTTCCCGAAG AGTACTCCGA
CTTGCCGCAA CTCCATGGTC GCGCGACGGT GGAAATGCTT ATCGACAAAG CTGATAAGTC
GACCTTTGAC TACAACGGAA AAATCGTTCC TCAGGCAAAA CTCGTAATGG TGATTGATGG
TTATACTGCT CCAGTCACTG GTGGAAACTT TATTGATTTG GTTCAGAAGG GCTTTTACAA
CAAAATGGAA ATCCAACGAT CGGATGGCTT CGTTGTACAG ACTGGTGATC CAGCCGGTGA
AGCCGATGGC TATGTTGCTA AAGGTAGCAA GACGGTAGGG AACGGAAAAC ACGGAGAGCG
TCTCATTCCG CTTGAAATCC TGGTTCGCGG AGACAGCACT CCGGTATACG AATCCACCAT
CGAAGACGAA GGCCGTGGTG GGGAGGCAAC GGTCCTGCCG TTTTCGGCCT ACGGAGCTAT
GGGCTGGGCA CGAGAAGAGT ACGATCCCAA TTCAGGTAGC TCACAGTTCT TTTGGTTACT
CTTTGATTCC GATCTGACTC CGGCAGGTAA AAACGTGTTG GATGGACGGT ATCCGTGCTT
TGGGTACGTC ACCGAAGGCG CCGACTTTTT GAGCTCCATC TTGGAAGGGG ACGTGATTGT
ATCGGCCAAA GTCGTCGATG GAGGAGAAAA TTTGGTGCAA CCGCAATCGT AA
 
Protein sequence
MASGSGSRVN KDPESLLRLG LPIKNKEVRK LQASLEGIKL DIGSKRKLAA ADAVKKSKAF 
LVGKDADKVK AACRDPSICG AIIKDMVVKL DPLADALKES QEAFQGSEQE RTALDKAYAA
QQVVVDQLTA LEEQLIPAGY KRPVPEEYSD LPQLHGRATV EMLIDKADKS TFDYNGKIVP
QAKLVMVIDG YTAPVTGGNF IDLVQKGFYN KMEIQRSDGF VVQTGDPAGE ADGYVAKGSK
TVGNGKHGER LIPLEILVRG DSTPVYESTI EDEGRGGEAT VLPFSAYGAM GWAREEYDPN
SGSSQFFWLL FDSDLTPAGK NVLDGRYPCF GYVTEGADFL SSILEGDVIV SAKVVDGGEN
LVQPQS