| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_11009 |
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| Symbol | |
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| ID | 7197628 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | + |
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| Start bp | 1082486 |
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| End bp | 1084393 |
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| Gene Length | 1908 bp |
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| Protein Length | 535 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178359 |
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| Protein GI | 219115127 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCCGGCAGT ATCAACTGGA GGGAATCGCT TGGTTACGTT TTCTACATAC ACTCAGACTG
AACGGCGCTC TGTGCGATTC TATGGGACTT GGGAAAACAC TACAGGCTTT GATTTGCGTT
GCCATTTCTC ACGACGTAGT CCACCATGCC GCACCAGATA GCAAACCAGT CTCCATCGTT
GTCTGTCCTT CTACTCTGGT TCGACACTGG ATCGCTGAAA TCAACAGATT TTTCAAAAGC
GACGATCCGG TTTTCTTTCC TCTCGAGCTT TCTGGTAGTA GCACGAGTCG TCGAGCAGTA
TGGGAAAAGG GCTTAGTATT TTGCAACATA ATTGTTACAA GCTATTCTGT TCTACGGAGC
GATATACGAA TGCTTGCATC GCAAAGCTAT CACTATTGTG TGCTCGATGA GGGCCACCTC
CTCAAAAATC CAAAGACAGG TACGCTGGAT TATCTCGAAT TTGAAAACTT GACAACCACG
TTCTGACTTC CGCATCGTTC CCTCGTTGCA CAGAGACGGC GAAGGCGTCT CGTCAGCTGC
GGTCGAAGCA CCGTCTCCTT TTGTCAGGAA CGCCGGTGCA GAATCATGTT CATGAACTGT
GGGCTGTATT TGACTTCTTA ATGCCAAATT TTTTGGGATC CTCGGTATTT TTCTCAGAAA
AGTATGCCAG AACTATATCG AAAGGACAAG CTCCTGGCGC ATCTGTGAGA GAGATCAGCG
AAGGAATAGA AAAGTTGAAG ACGTTACATC AGCAAGTACT ACCGTTCATA CTCCGGAGAG
AGAAACAACA AGTTCTTAGA GAATTACCAT CAAAATTAGT CACTCAGATT GAAGTTCCCA
TGAGTGATCT GCAGCGAAGG CTCTACACTG ATTTCTGCTC GTTTGCAGAT GTCCAACAGT
CACTCCGGGC TCTAGATCGC GCTGCGAAGG ACGATCTCGG CGATAGATGC CTGGAGCAGG
CAGGGCGTAG CTCGCTACAG GCCCTTTTGT TTTTAAGACT TCTCTCAACT CACCCATGGC
TTGTCAGATC CGCCATACCA GTCGCCTCGG AAATCAGCGA CAACGATTGG CTTCGTTTTG
ATACCTCCGG TAAAATCAGA GCGTTGGCTG ACTTACTCCG AGAGCTTAGT ATTTTCACCG
ACGACTTAAG CGCTGCCGAT AACGATTCGT CACTTTTGTA CTGCGAGGAC GACCATGTTG
ATGTAGATGT TTATTCCAGC CTCGTCAATT CATCAGACAA TCACATGCAA CCCGCACCCA
CAACCTCCGA AGTCCAATCG CAGACAAAGT GCTTGATCTT CGCTCAGTTC ATTCAAAGTC
TTGATGTTGT GGAAAAGCTT TTATTCAAGC CTCACATACC ATCGCTGAAA TATCTTCGAT
TGGATGGAAG AGTTCCTGCC AGAAGACGCT ATGCCATTGC CGAAGAGTTC AACCGTAACG
ATGAGATCAA GGTTTTGCTG CTAACAACAA GGGTCGGTGG TCTTGGACTA AACTTAACAG
GTGAGTAAGG GTCACGAGCT TCTGTCTCAC TGTCACGGGG ATATGTTTTT CTCATGGACA
TCGTACAATA TAGGAGCGGA CACTGTAATT TTTCTCGAAC ATGACTTTAA TCCTTTTGCT
GATCTTCAAG GTATGCAACA ATTGCGAGAC ATGGAGATAT TTGCATAGCA CTGGCTCAAC
CTTCTATATC ATTTTAAAGC AATGGACCGG GTCCACAGAA TTGGCCAAAA GAAGGCTGTA
TGCGTTTACC GGTTAGTTCT GGTCGACTCA ATTGACCAGA GAATTATGAA GTTACAAGAA
AAGAAGTTGG CTATGAGCGA GGCGATAGTG AACGCCGACA ATTCTACTAT GTTCAGCATG
GGGACTGATC GATTGCTTGA CATTTTCACG ATGAGAAGCG ACCAAGAG
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| Protein sequence | LRQYQLEGIA WLRFLHTLRL NGALCDSMGL GKTLQALICV AISHDVVHHA APDSKPVSIV
VCPSTLVRHW IAEINRFFKS DDPVFFPLEL SGSSTSRRAV WEKGLVFCNI IVTSYSVLRS
DIRMLASQSY HYCVLDEGHL LKNPKTETAK ASRQLRSKHR LLLSGTPVQN HVHELWAVFD
FLMPNFLGSS VFFSEKYART ISKGQAPGAS VREISEGIEK LKTLHQQVLP FILRREKQQV
LRELPSKLVT QIEVPMSDLQ RRLYTDFCSF ADVQQSLRAL DRAAKDDLGD RCLEQAGRSS
LQALLFLRLL STHPWLVRSA IPVASEISDN DWLRFDTSGK IRALADLLRE LSIFTDDLSA
ADNDSSLLYC EDDHTKCLIF AQFIQSLDVV EKLLFKPHIP SLKYLRLDGR VPARRRYAIA
EEFNRNDEIK VLLLTTRVGG LGLNLTGADT VIFLEHDFNP FADLQAMDRV HRIGQKKAVC
VYRLVLVDSI DQRIMKLQEK KLAMSEAIVN ADNSTMFSMG TDRLLDIFTM RSDQE
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