Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_10988 |
Symbol | |
ID | 7197900 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 1311862 |
End bp | 1313664 |
Gene Length | 1803 bp |
Protein Length | 444 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178404 |
Protein GI | 219115217 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAACT TTGGCGTGTC GCGCGATCTT ATCGACGACA CCATCTTTGG CAAGATCGTT CCCGGAGTTG GACTGACCCT CGTCGTGGGA AACATCTATT ACTCCTGGCA AGCGGTCCGT CTCACTACCT TGCACGGACG CCAGTACACT GCGCAGCCCT ATGGTCTCAA CACGGTCGGA ATTTTTGCGT TTATCTTCAA CATTATCTAC CCCGTATACT TCACTTCCGT GGACGCCGTG GGGCCCTCCG AGGCTTTCTT GACCGCGTAC AAAGTGGCCA TTGCCGCTAA CTTTATTACC GGTCTACTGT CCGTCGTTTT TGGTATCATT GGACCCACAC TCCTCCGCAT GATCCCCCCG GCCGCTCTTT TGGTACCGAT TGCCGGGATC GGATTCAGCT TCCTGGGCCT CGAACAGCTT ACGACAACCC TGGCCGCCCC GTACGTAGCC GTCTTGGCCA ACCGCTCCCT CGCTTCACGT TCGTATGATG AACCAAGTCA TTTCTCACAA ACAACATTCT CTTTTGACTC TCGTTTACAG ATTGGTAGGA TACTTGGCAA TCATGTGGGT GTATCTGGGA TGGTACGCGG GCGTCAAGAT TGGTTGGGGC AAATTCCGCA TCCCCGAAGC GGTCACCGTC ATTTTGGTCG GAGTCGTCAT GGGATGGATC ACGGGCTTGA ATGACGCGTC GGCGGTCCGC AGTGCTTCCA AGCTTGTCAA GTGGTCGGCT CCGGTCTGGT CCGGGGACGA TCTCTTTGCC GGTACGTTAA AAACGCTTAT GGTGTCTTGA TTGCATAGCA CAAACAACTT CTATTCGCAA AGAACGAATG TATGTTTCCT TTTCGTGTGA CTCTCGGAGC TCTTTCTAAC ATATGCACAA CAATGGTTTC GTCATCTCCT CTCCTGCTCT AGACTTTAGC GAAATTGGGG ACTACCTTGG AATTATCATC CCCATTGCCA TTGCGAGTTC TTCGGCGACG CTGATGTAAG AAACAGATGA AAGTCATTTA GGTTCTGACT GTCACTGCTT CTACTTCCAA GATTGTCGAC AGCTCACTCC AATCCTTGTT CGTCGTCGCT CTCCTTTTCC AGGTGCCTCG TGAGTGCTAA GGAAGCGGGC GATCCTTACC CTGTCCGGGA GACGATGATC ATTGATGGCA TTGGTACCTG CATTGCTTCA TTTTTCGGTA GTCCGTTTGG TACCGTTATT TATGTCGGTC ATCCCGCTCA CAAGCGTTCG GGTGCGACTG TCGGGTACTC TTTTTACAAC GGATTCTTGT ACTTGTATGT ATTATGACTA CGTTTACATC AGGAAGAGAT GACCGTGAAT ATAGCTGTAT CGTTCACAAT CTCACTGATT CTTATTTATC GCCGTGCAGG ATCTTCTGTT TGACGGGCAT CCTAGCGTTG ATTCAGAGTA TCGTGAACCA GGCAACCGTC GGACCCATCG TTTTCTTTGT TGGTCTCATG ATCAACGAGG AAGCCCTCAA TTTTATGCCT TCTCGCCACT ATTCGGCGTA CATCATCGGT CTCTTTCCAA GCATCTACGA CTGGTTAGTC AACGTATCGA ATCGTTCACC ACTCGAGGGT TTCGCGCGGG ATGGGAGCTA CGAGGGCAGC TGGAATACCG AACTACCGCC AGGATCGTCC GGTTTCATCG GTGTGCTGTC CTGGAAACGC GGATCGCTGC TTGTTTCGAT GGTTTGGGTC GCCATGATTG TCATGGTGCT GGATCGCAAG TGGAACATGG CAATTTTGTG GGCTATCATT GGTTCCCTTT TTGCCTTGTT TGGCATCATC CAC
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Protein sequence | MTNFGVSRDL IDDTIFGKIV PGVGLTLVVG NIYYSWQAVR LTTLHGRQYT AQPYGLNTVG IFAFIFNIIY PVYFTSVDAV GPSEAFLTAY KVAIAANFIT GLLSVVFGII GPTLLRMIPP AALLVPIAGI GFSFLGLEQL TTTLAAPLVG YLAIMWVYLG WYAGVKIGWG KFRIPEAVTV ILVGVVMGWI TGLNDASAVR SASKLVKWSA PVWSGDDLFA GTLSTAHSNP CSSSLSFSRC LVSAKEAGDP YPVRETMIID GIGTCIASFF GSPFGTVIYV GHPAHKRSGA TVGYSFYNGF LYLIFCLTGI LALIQSIVNQ ATVGPIVFFV GLMINEEALN FMPSRHYSAY IIGLFPSIYD WLVNVSNRSP LEGFARDGSY EGSWNTELPP GSSGFIGVLS WKRGSLLVSM VWVAMIVMVL DRKWNMAILW AIIGSLFALF GIIH
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