Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_10723 |
Symbol | |
ID | 7197717 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 720637 |
End bp | 721912 |
Gene Length | 1276 bp |
Protein Length | 400 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178562 |
Protein GI | 219115533 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CAGCAGAAAC ATTCTTACTT ACTTCGAGAA GCCTTGACAA ATCTAGGCCC CGCCTTTGTC AAAGGAGGAC AGCAACTTTC AATCCGTCCT GATCTGGTTC CGCCGGCAGT GTTAAAAGAG CTCCAGAAGC TGTGTGACGC CGTCCGTCCA ATTCCAGACG ATATTGCAAT GCAGTTGATT CGAAAGGAAC TGGATCAAGA TGATTTGGAG GTCTTGTTTC AAGATCTGAA ACTTGTTGCA TCAGCAAGTT TAGGACAAGT CTATAAAGCG AAATTGCGCT CCAACGGGCA TTATGTTGCT ATCAAAGTTC AACGTCCTGA CATGCAGCGA AATTTTAGCC TCGATTTGTG TCTTCTCCGA AAGGTTGGTG TGGTCGTTGA CGTGTTCACG TCCACTTTCA CTAACCAGCC CCCGTTTCAT AAAGCGCTGT ATGAGTCCTT TTCGCGAGGG TCGTACATGG AGTTGGATTA CGAAAATGAA GCCGCAAATC AGACGAAGTT CCAGCATGAG CTAGCCATCC GGAAATGTCC AGTTGTGGTG CCAGACGTAT ACAAAGAATA TTCTTCACAG AGAGTCTTGA CCTCTCAATG GATTGAAGGT GTTAAATTAG CGGACTCTCC GAAAGAGCGG ATTCGAGAGC TCATTCCTAT AGGCGTCGAA TTGTTTTTGA CTCAACTGCT GGATATTGGG GCTTTCCACG CCGATCCTCA CCCTGGTGCG TATGAAGACT TATATTGACT GACGGGATGT TTGTAGTTTG AGCGACTAAT CAAATTTTTG TTTAACAGGA AATTTGCTCG TCACGAAGGA CGGTAGGCTT TGTTTGCTGG ACTTTGGACT GTGCGCGGAA GTAGATGCTA AGTCAAGAAA CGCAATGACA AAGGCTATTG TGCACCTTTT GTTGAAGGAT TTTGATTCTC TGGTGTCCGA AGATGCGAAG GAAATGGGAT TTCTTCCGCA AGACTTTGAC ACAAGCGAAT TGAAGCCATT GCTAACCAAG ATTTTGACTG TTGGACTGAT CGATTCTGGA TCAGATCTGC GCAAGCGCAA GCGAAAATTG TTGGAGATAT CCAACGAGCT CAACGAAGTT TTCTTTCAGT ATCCGTTTAG TGTGCCTCCA TTCTTCGCGC TGGTGACTCG TGGTCTTGGA CTATTGGAAG GTATCGCATT ATCAGGCGAT CCGGAATTTG ATATATTCCG TGCGAGTGCA CCATATGCTC GCCGTCGCGC AGTGGCACTT CTGGGATCGC ACAGTTTAGT GCAACGAAAA GCTTAA
|
Protein sequence | QQKHSYLLRE ALTNLGPAFV KGGQQLSIRP DLVPPAVLKE LQKLCDAVRP IPDDIAMQLI RKELDQDDLE VLFQDLKLVA SASLGQVYKA KLRSNGHYVA IKVQRPDMQR NFSLDLCLLR KVGVVVDVFT STFTNQPPFH KALYESFSRG SYMELDYENE AANQTKFQHE LAIRKCPVVV PDVYKEYSSQ RVLTSQWIEG VKLADSPKER IRELIPIGVE LFLTQLLDIG AFHADPHPGN LLVTKDGRLC LLDFGLCAEV DAKSRNAMTK AIVHLLLKDF DSLVSEDAKE MGFLPQDFDT SELKPLLTKI LTVGLIDSGS DLRKRKRKLL EISNELNEVF FQYPFSVPPF FALVTRGLGL LEGIALSGDP EFDIFRASAP YARRRAVALL GSHSLVQRKA
|
| |