Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_10102 |
Symbol | |
ID | 7197521 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | - |
Start bp | 480675 |
End bp | 481529 |
Gene Length | 855 bp |
Protein Length | 214 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177943 |
Protein GI | 219112383 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.656124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAGTCGGTCT GTCCCTTGTG TTGCGAGGAG TTGGATTTGA GTGATCAGAG TTTCTATCCC TGTCCCTGTG GATACCAGGT GTGCATGTGG TGCTGGCACC GCATCAAGGA ATCGGAGTCG GGCTTGTGTC CGGCTTGTCG ATCCCCATAC GGCGAAGATC CCCACCAATT CAGTGCAGTC GACGTGGAAG CCGCTCTCAA GGCCAACAAA CTAAAAGAAG ACGCCGTCCG CAACCAATCT CAACACGCCA AACACCAGAA TATCAGCAAT ATCGGCCACC ACAGCCTCAA CAGCCTCAAC AGCAGCCACA GCCACAGCAA TACTCATCCA CACAACCATC AGAACAACAA TAACAGTCAC AGCAGCAGCA ACGGCAGTAG TAACGCCAAC AATGCAAACA GCAGCAATAA TCAAAACATG GTCATGGAAG CCCCCAAGGA TCGGACCTTG TTGGCCAATA TGCGCGTCAT CCGGCGGAAT CTCATTTACG CCGTCGGGCT ACCCCCTTCC ATCGCTAACG AAGAAACACT CCGCAAACCG GAATATTTTG GACAGTACGG ACGTATCGCA AAAATGGTAC TCAACCGCAA CAACGTTACG GCCTCCAATA CCGTCATCAA CGGTGAAATC CGTCGCGCCT CCGCCAGCGC CTACGTAACC TTTGCGCACA AAGAAGACAC GTTGGCTTGC ATACTGGCGT TGGACGGATT GGTACTCGAT CACCGCAGCG TGCGAGTAAG TTACGGTACC AGCAAGTACT GCTCCTCCTT TATCAAGAGC GTCCGCTGCA ACAACCCCGA ATGCACGTAC CTGCACGAAA TGGGTGCGGA AGAAGACACC TTTACGAAAC AAGAA
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Protein sequence | QSVCPLCCEE LDLSDQSFYP CPCGYQVCMW CWHRIKESES GLCPACRSPY GEDPHQFSAV DVEAALKANK LKEDADRTLL ANMRVIRRNL IYAVGLPPSI ANEETLRKPE YFGQYGRIAK MVLNRNNVTA SNTVINGEIR RASASAYVTF AHKEDTLACI LALDGLVLDH RSVRVSYGTS KYCSSFIKSV RCNNPECTYL HEMGAEEDTF TKQE
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