| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG2185 |
|---|
| Symbol | |
|---|
| ID | 2551390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 2292023 |
|---|
| End bp | 2293339 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637150753 |
|---|
| Product | transporter, putative |
|---|
| Protein accession | NP_906233 |
|---|
| Protein GI | 34541754 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATACA CCCTTGTTTT ATATATGGCA GTGGCTTCTA TCGGCCTGGC TCTCTTCTGG
ATATTCGAGA GGCTGATGAT CCATGGCAAT ACCCACTGTC GTCTTCGTCG TGCCTACTAT
CTGGGAGGGT TCGTCTCGGT AGTCGTCTTG CCTTTCCTGG GCTATTTCCT TCCCTCTTGG
CCGAGCTTAT TTATCCAAAA CAGGTCGGTC GGGATGGAGA TACTCCGTTC CATCGAGATC
GTATTGCCCG AGGCTTTGGT CAGAACGGCG GGGGCGGATG CTATTCCTGC TGTCTCGCCT
CTCCTTCGGG GCCTGTTCTT GGCTTGGTTA CTTGGCATAG GCGTACTGCT GATTCGTTTC
GGTATTCGCC TCCGTTCCCT CCTGTGTCTT ATTTGCGGTG CCGAACGGGC GGAGATAGAG
GGTGTACCCG TTTACTTTGC TCCTCGTGTA AGGATGCCGT TCAGCTTCTG TAGGCGTATT
TATCTTCCGA CCGATCTGCG CTCATACCCT TCTGTGAGAA ATGTTCTTAT CCATGAACAA
GAACATACCC GAGCAACGCA CTTTGTCGAT CTTTTGATCG CCGAAGTGGC ATGCATGCTG
TTTTGGTTCA ATCCGTTTGC TTGGGCTTTG AAGCGCGATA TGCAGCGCAA TTTGGAGTTT
TTGGCCGATC GGGCTGTGCT CCTCAGAGGC GTGAGCAGAC GCGAATATCA ATATGAATTG
TTGGGATTTA CGCTGGAGGT CGCGGCCGGA CCTCTGTGTA GTTCTTACAA TATAAACGAC
TTAAGAGAAA GAATCAGAAT GATGAACAAA ACGAAATCCA GTCGTGCGGC CGGAGCCAGG
TATCTTGTCG CACTCCCGTT GGCTGCCCTT ATGCTTCTGA GCGGTAAATG GCTGTGGGCG
GGCAATGCCG TATCCGAAGT CCGGGAAGTA GTAGCAACCG TTGCGAGCGA TCCCGCCCCC
TTGTCTGATG CTCCTGACAT CTCCCTGCAG CAGGACGAGG ATCCTGTGTG TTCCGAGCTA
GATACTCCAC CATCTTTCCC CGGGGGAATG TCCGAACTGA TGCACTTTCT GAGCAAGAAT
TTAAAGTATC CGGAACAATC TGCAAAGAAC AGCATCCAAG GTCGAGTTGT GGTCTCGTTT
ATTGTCGAAA AAGACGGCAG ACTGACTAAC ATACAAGTGG AAAAAAGCGT AGCACCCGAA
TTGGACGCAG AAGCCGTAAG AGTGATTTCA GCTATGCCGA AGTGGAGTCC CGGCAAACAA
AAGGACAAGA AAGTCCGCGC GAGGGTAAAC CAACCAGTCA TATTCCGCCT GAAGTAG
|
|---|
| Protein sequence | MTYTLVLYMA VASIGLALFW IFERLMIHGN THCRLRRAYY LGGFVSVVVL PFLGYFLPSW
PSLFIQNRSV GMEILRSIEI VLPEALVRTA GADAIPAVSP LLRGLFLAWL LGIGVLLIRF
GIRLRSLLCL ICGAERAEIE GVPVYFAPRV RMPFSFCRRI YLPTDLRSYP SVRNVLIHEQ
EHTRATHFVD LLIAEVACML FWFNPFAWAL KRDMQRNLEF LADRAVLLRG VSRREYQYEL
LGFTLEVAAG PLCSSYNIND LRERIRMMNK TKSSRAAGAR YLVALPLAAL MLLSGKWLWA
GNAVSEVREV VATVASDPAP LSDAPDISLQ QDEDPVCSEL DTPPSFPGGM SELMHFLSKN
LKYPEQSAKN SIQGRVVVSF IVEKDGRLTN IQVEKSVAPE LDAEAVRVIS AMPKWSPGKQ
KDKKVRARVN QPVIFRLK
|
|---|
| |