Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1983 |
Symbol | |
ID | 2552123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 2072771 |
End bp | 2073532 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637150567 |
Product | CRISPR-associated Cmr5 family protein |
Protein accession | NP_906057 |
Protein GI | 34541578 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1604] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
TIGRFAM ID | [TIGR01898] CRISPR-associated RAMP protein, Cmr6 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.73204 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTTCG GATACTGGTA CTATCGAGAG TATTTCAATA CGATAAAACT CAATAGTGAG GGCATTGTAA CCAACTTCTC CACGTTCAAT AAAGGGAAGA ACGATAAACT AATAAAGGGA GCTACTCTCC CTCCCTGCGA CAAGGAAAAT GATATTAAGG ATGTAACTGG CTTCGAGCTA AAGACCTGCT ATCCGGGGTT GCTCTGTGGT GTGGGCTATC ACCACGAGAT AAACAAACCT GCGGATGAAA AGGGTAAGAA GGTTGAGGGG GATAAGGAAG ATGATGCACC AGAGGTTTAC AACCTTGGGA TGTACTTCGA CTATACATCG GGTTTGCCTG TTATCCCCGG CTCTTCTATC AAAGGGATGC TACGCTCTGC CATCGAAGAG TGGGACTTCC TTGCAGATTA TGAGCTCAAC AATGGAGTTA CACGTGAAGA AATTATTGAG AAAGTATTTG TAGGAAAAGA ATATTCCATT TATGACAGAG ACATTTTCCT CGATGCCATT CCTATAAGAG TAGATAACAC TCTCTTTGGA GAGGACTATA TCACGCACCA TCCTAATCCT CTGCAAAACC CTAATCCTGT ACGTTTTTTG AGGGTTGAAC CAGGTGTAAC CTATCAGTTT CGCTTTATCC TGAAAGATCA TGGAGAGAAA CTAACGGTAG ACTTTAGGAC AAAGCTCTTC AAAGCTATTA TCTGCACTTT TGGTCTCGGG GCCAAGACCA ATGTCGGCTA CGGGCAATTT GTAGAACCTT AG
|
Protein sequence | MNFGYWYYRE YFNTIKLNSE GIVTNFSTFN KGKNDKLIKG ATLPPCDKEN DIKDVTGFEL KTCYPGLLCG VGYHHEINKP ADEKGKKVEG DKEDDAPEVY NLGMYFDYTS GLPVIPGSSI KGMLRSAIEE WDFLADYELN NGVTREEIIE KVFVGKEYSI YDRDIFLDAI PIRVDNTLFG EDYITHHPNP LQNPNPVRFL RVEPGVTYQF RFILKDHGEK LTVDFRTKLF KAIICTFGLG AKTNVGYGQF VEP
|
| |