Gene PG1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG1953 
Symbol 
ID2553364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand
Start bp2043714 
End bp2044649 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content47% 
IMG OID637150545 
ProductYitT family protein 
Protein accessionNP_906035 
Protein GI34541556 
COG category[S] Function unknown 
COG ID[COG1284] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTTA CAAAAACTTC AAAACTCTAT TACAAAGTCC ACGACTACAT CCTTATTATT 
CTGGGATGCT CCATCTATGC TTTTGCGTGG ACGGGCTTCA TCCTTTCCCA AGGAATTACC
ACGGGAGGAT TGGCCGGTAT CTCCACTCTG ATCAAGATCG CCACGGGTAT TCCGGCTGCG
ATACCGTACA ATATCATCAA TCTGGGATTA GCGGTACTCG CTCTGATCTT CTTGGGATGG
CGTTTCATGG TCAAGACGGT CATAAGCGTT GTCATAATGG CCATTATCAT CCCGATAGGT
GAAGAGTATC TGGTCGTCAC GGAGATCGTC AATGGCGTAA AAGTTTTTAC GCCTCTTCTA
CTGCCGAATG AACCGGCCTT AGCTCTGGTG ATCGGCTCCA TTCTTAGCGG TCTGGGTATT
GCGATAGTAT TCTCCGTGAA CTCCAGTACG GGCGGTACCG ATATTATCGT AGCCATCATG
AACAAGTACA AGAACATGTC GTTCGGACGC GCCATTCTAC TGGTGGACTG TACCATTATT
TTGTGCTCGT ATCTGGTCAA TGTCTACATC GCCGGCAAGT CACCTTCCGA CGCTTTCAAC
CTGCTTATCT ATTCGGCCAT AGAGGTTATC CTCGTATCTA CAGTCTTGGA TTGGTATCTC
AATTCGAATA GACAGTCCGT GCAATTCCTC ATCTTCAGTC TCAAAAACGA AGAGCTCAGT
AATGCCATTC AAGAGCGCAT CAAAAGGGGG TGTACCCTGC TGGATGCGAC AGGAGGCTAT
TCCGGCCAAC CTTGTAAAGT TCTTGTGGTC GTTGCACGCA AGACACAAAG CCTATCCATC
CACAGAATCA TTCAGGAGAT CGACCCCAAA GCCTTTGTAT CCGAATCCGT AGTGAGAGGG
GTATATGGGG AAGGATTCCA AGCAATAAGA AAATAA
 
Protein sequence
MALTKTSKLY YKVHDYILII LGCSIYAFAW TGFILSQGIT TGGLAGISTL IKIATGIPAA 
IPYNIINLGL AVLALIFLGW RFMVKTVISV VIMAIIIPIG EEYLVVTEIV NGVKVFTPLL
LPNEPALALV IGSILSGLGI AIVFSVNSST GGTDIIVAIM NKYKNMSFGR AILLVDCTII
LCSYLVNVYI AGKSPSDAFN LLIYSAIEVI LVSTVLDWYL NSNRQSVQFL IFSLKNEELS
NAIQERIKRG CTLLDATGGY SGQPCKVLVV VARKTQSLSI HRIIQEIDPK AFVSESVVRG
VYGEGFQAIR K