Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1888 |
Symbol | |
ID | 2551737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 1985736 |
End bp | 1986350 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637150483 |
Product | hypothetical protein |
Protein accession | NP_905973 |
Protein GI | 34541494 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0425] Predicted redox protein, regulator of disulfide bond formation |
TIGRFAM ID | [TIGR03527] selenium metabolism protein YedF |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.660532 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAG TGGATACTCG GGGGAAACTC TGCCCCCTCC CTCTTATTTT GCTCAAGAAA GCCGTTGACG GCACTCCCGT CGGAGAAGAA ATCTCCGTAA TGACTGACAA TGAAACGGCA AAATGCAACC TGCGCGATTA TATCGGCGAA CTGGGAGCCG TCGCCATCGA ATCCGAAGAG GGCGACTATA CAACGCTCAC CTTTCGGGTA TCGACCCATA TCGAAGAAGC GGCCCCGACT TCCTGCCCGG CCGAGCATCC GCATACAGTG GCACAAGGCG ACTACCTCAT CGTGGCCAAA AGCAATCGGA TGAGCACCGG AAATGACGAA TTGGGCAGCA TCCTGATGCG CGCTTTCGTC AATGCCATCG GAGAGCTCGA TCGACTTCCT TCGCATATCA TCCTTTACAA TACGGGGGTG CTGCTGGCCG TCGAGGGCAC GGACACGGCC GAAACACTGG CCGAACTGAA CAAGAAGCAC GGCATCCCCA TCATCGTATG CGGCACCTGC GCCGACTACT ATGAAGTGAA AGACAAACTA CGCATCGGTA CCATCTCCAA TATGTACCGG ATCATGCAGC TTCAAGTAGC CACACGCCAC ATTATCTATC CTTGA
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Protein sequence | MKVVDTRGKL CPLPLILLKK AVDGTPVGEE ISVMTDNETA KCNLRDYIGE LGAVAIESEE GDYTTLTFRV STHIEEAAPT SCPAEHPHTV AQGDYLIVAK SNRMSTGNDE LGSILMRAFV NAIGELDRLP SHIILYNTGV LLAVEGTDTA ETLAELNKKH GIPIIVCGTC ADYYEVKDKL RIGTISNMYR IMQLQVATRH IIYP
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