| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1729 |
|---|
| Symbol | |
|---|
| ID | 2552409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 1818432 |
|---|
| End bp | 1818971 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637150344 |
|---|
| Product | thiol peroxidase |
|---|
| Protein accession | NP_905837 |
|---|
| Protein GI | 34541358 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2077] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTAA AAATATTTCT AACAGCATTA TCAGTTATGG CAACAGTAAC ATTACAAGGC
AAAATCAACA TCAATACTAA TGGACAGCTC CCGGGTGTAG GTTCAGTTGC TCCCGACTTC
AAAGCCGTGA GGGCTGATTT GAGCGAAGTA TCGCTCTCGG AATTCAAAGG AAAAAGAGTG
GTAATCAACA TATTTCCCAG TATAGATACA GGTGTCTGTG CAGCCAGCGT ACGCCGTTTC
AATCAGGAAG CATCTTCTTT GGACAATACG GTAGTACTCT GCCTTTCCAA GGACCTGCCT
TTTGCACAGG CTCGCTTCTG TGGTGCCGAA GGTCTGGACA AGGTTATCAC CGTTTCAGCT
TTCCGCTGCG ACTGCTTTGA GAAGGGTTAT GGTCTGCTGA TGACCGATGG CCCTTTGAAA
GGTCTCTTGG CTCGTGCCGT CGTTGTAGTG GACGAAAACG GTAAGATCAT TTACGAAGAG
CTTGTTCCCG AGATCACTCA AGAGCCGAAT TATGAAGCTG CTATCGCTGC ACTGAAGTAA
|
|---|
| Protein sequence | MSLKIFLTAL SVMATVTLQG KININTNGQL PGVGSVAPDF KAVRADLSEV SLSEFKGKRV
VINIFPSIDT GVCAASVRRF NQEASSLDNT VVLCLSKDLP FAQARFCGAE GLDKVITVSA
FRCDCFEKGY GLLMTDGPLK GLLARAVVVV DENGKIIYEE LVPEITQEPN YEAAIAALK
|
|---|
| |